DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment jigr1 and madf-9

DIOPT Version :10

Sequence 1:NP_651409.1 Gene:jigr1 / 43093 FlyBaseID:FBgn0039350 Length:336 Species:Drosophila melanogaster
Sequence 2:NP_500389.2 Gene:madf-9 / 191167 WormBaseID:WBGene00022608 Length:333 Species:Caenorhabditis elegans


Alignment Length:305 Identity:66/305 - (21%)
Similarity:122/305 - (40%) Gaps:61/305 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 QTGEFDLGLIREYRSHPVLYDRSNKRFKDKLYVAHIWEQIAHKLGYDATSIRERMTTLRNRYNIE 89
            :|..|::.||.|.::.|.|||:|::.:....:....|.:||..|...:..::.|..|||:||..|
 Worm    45 ETPVFNIRLIAEVKARPFLYDQSDEGYNLLSWRNSAWNEIAENLETTSEHVKTRWKTLRDRYKKE 109

  Fly    90 KRRVENGLSTQSSQWPLFESLQFLGDHIRPRRSFKNMSVKEEDEETYEVDDCRSDSNGHMNSIKD 154
            :::  ..:|.::|.|.....|:|:..|::.|.:       :|.:........:.:.|||::.:  
 Worm   110 EKK--ERVSKKASSWVFQRPLKFIQAHLKDRHT-------DETDSNQSEPAVKPEPNGHVSPM-- 163

  Fly   155 ELEDDSEIFDCEQALPVTTVLGIPLNNSDEANKSQRSTNGEMPNGKGYNHFAESYHR----RHQN 215
                       |.|:   :.:...|..:.:::||..|| |||.:.......:.|..:    :...
 Worm   164 -----------EAAM---SFIENELIRTQDSSKSSGST-GEMESSSASTASSASSSKNTGTQEGG 213

  Fly   216 QPEYIISSPIVNPMR---SNKRGSQHLDDHPSKRRVDDSLSISGYYPTQPLAPLPPAYAKFRGFG 277
            :...|...|:..||.   |....|...:..|:.:|...|:       |:.:.|:....|      
 Worm   214 EASVITPPPLPIPMAVTPSPSATSSASNGGPAVKRSRVSI-------TEGMTPVASRNA------ 265

  Fly   278 EFMCHSLCDMPAATALRLVQKFTRELVQSSLRNEDSGSKEKTDEV 322
                      .||.|..|...|...|.|.:...|     |:.||:
 Worm   266 ----------AAAAAASLGLSFFPGLSQWATTRE-----EEEDEI 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
jigr1NP_651409.1 MADF 33..118 CDD:214738 25/84 (30%)
madf-9NP_500389.2 MADF 52..136 CDD:214738 25/85 (29%)

Return to query results.
Submit another query.