Protein Alignment jigr1 and Hmgb3

DIOPT Version :9

• Sequence 1: NP_001097920.1
• Gene: jigr1 / 43093
• FlyBaseID: FBgn0039350
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: NP_001280552.1
• Gene: Hmgb3 / 15354
• MGIID: 1098219
• Length: 200
• Species: Mus musculus
• Alignment Length: 197
• Identity: 41/197 - (20%)
• Similarity: 69/197 - (35%)
• Gaps: 62/197 - (31%)

  Fly   197 PNGK--GYNHFAESYHRRHQNQ-PEYIISSPIVNPMRSNKRGSQH-----------LDDHPSKRR 247
            |.||  .|..|.::....|:.: ||.    | ||....:|:.|:.           .|:.....:
Mouse     9 PKGKMSAYAFFVQTCREEHKKKNPEV----P-VNFAEFSKKCSERWKTMSSKEKSKFDEMAKADK 68

  Fly   248 VDDSLSISGYYPTQ-------PLAPLPPAYAKFRGFGEF----------------------MCHS 283
            |.....:..|.|.:       |.||..|....|....||                      |.::
Mouse    69 VRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNPGISIGDVAKKLGEMWNN 133

  Fly   284 LCD---MPAAT-ALRLVQKFTRELVQSSLRNEDSGSK----------EKTDEVDPVDQSSESQEE 334
            |.|   .|..| |.:|.:|:.:::.....:.:..|:|          |:.:|.:..::..|.:||
Mouse   134 LSDNEKQPYVTKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEEEEEEEEE 198

  Fly   335 DE 336
            ||
Mouse   199 DE 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jigr1	NP_001097920.1	MADF	33..118	CDD:214738
Hmgb3	NP_001280552.1	HMG_box_2	13..78	CDD:370242	12/69 (17%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	71..97		5/25 (20%)
		HMG_box	93..160	CDD:366139	13/66 (20%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	161..200		7/38 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900