Protein Alignment jigr1 and Hmg20b

DIOPT Version :9

• Sequence 1: NP_001097920.1
• Gene: jigr1 / 43093
• FlyBaseID: FBgn0039350
• Length: 336
• Species: Drosophila melanogaster
• Sequence 2: XP_006513311.1
• Gene: Hmg20b / 15353
• MGIID: 1341190
• Length: 415
• Species: Mus musculus
• Alignment Length: 361
• Identity: 71/361 - (19%)
• Similarity: 115/361 - (31%)
• Gaps: 138/361 - (38%)

  Fly    12 LPKGRGRPRATYAQTGEFDLGLIREYRS-----HP----------------VLYDRSNKRFKDKL 55
            ||.|...|...|.:       .:.|.|.     ||                .|.....:|:.|:.
Mouse    66 LPNGPKAPVTGYVR-------FLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPAEKQRYLDEA 123

  Fly    56 ------YVAHIW---EQIAHKLGYDATSIRER-----------MTTLRNRYNIEKRRVE-NGLST 99
                  |:..:|   :..|:|:..:  .|:|.           |.||.|.:    :.|: :|.||
Mouse   124 EKEKQQYLKELWAYQQSEAYKVCTE--KIQENKIKKEDSSSGLMNTLLNGH----KGVDCDGFST 182

  Fly   100 QSSQWPLFESLQFLGDHIRPR----RSFKNMSVKEEDEETYEVDDCRSDSNGHMNSIKDELEDD- 159
              ...|:|.. :|| |..:.|    |..:.|:|..|::........:|     |:|.::.||.:
Mouse   183 --FDVPIFTE-EFL-DQNKAREAELRRLRKMNVAFEEQNAVLQRHTQS-----MSSARERLEQEL 238

  Fly   160 -----------SEIFDCEQALPVTTVLGIPLNNSDEANKSQRSTNGEMPNGKGYNHFAESYH--- 210
                       .::....||| ..:...:|:..:           ||.|.....:.:....|
Mouse   239 ALEERRTLALQQQLQAVRQAL-TASFASLPVPGT-----------GETPTLGTLDFYMARLHGAI 291

  Fly   211 RRHQNQPEYIIS---------SPIVN-----------PMRSNKRGSQ------------HLDDHP 243
            .|...|.|.:|:         :|:.:           |.||...||.            ..:.||
Mouse   292 ERDPAQHERLIARVKEILARRAPVTDLLDQEMPLPTRPERSYTLGSPGPPQMKSQPHPFSFEPHP 356

  Fly   244 SKRRVDD--------SLSISGYYPTQPL---APLPP 268
            ..:|..|        ..|.||....:||   .|.||
Mouse   357 RLQRPGDLPASQGGSHYSGSGTEEPRPLDSDTPPPP 392

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
jigr1	NP_001097920.1	MADF	33..118	CDD:214738	26/126 (21%)
Hmg20b	XP_006513311.1	HMGB-UBF_HMG-box	70..134	CDD:238686	10/70 (14%)
		OmpH	190..>254	CDD:214922	13/70 (19%)
		FAM222A	<314..>400	CDD:373691	18/79 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5648
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900