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Protein Alignment jigr1 and LOC108350839
DIOPT Version :9
Sequence 1: | NP_001097920.1 |
Gene: | jigr1 / 43093 |
FlyBaseID: | FBgn0039350 |
Length: | 336 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017448593.1 |
Gene: | LOC108350839 / 108350839 |
RGDID: | 11440908 |
Length: | 214 |
Species: | Rattus norvegicus |
Alignment Length: | 62 |
Identity: | 14/62 - (22%) |
Similarity: | 28/62 - (45%) |
Gaps: | 13/62 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 285 CDMPAATALRLVQKFTRELVQSSLRNEDSG----------SKEKTDEVDPVDQSSESQEEDE 336
|:..|| :|.:|:.:::.....:.:... ||:|.:|.|..:...|.:||:|
Rat 144 CEKKAA---KLKEKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEDEEEEEEE 202
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
jigr1 | NP_001097920.1 |
MADF |
33..118 |
CDD:214738 |
|
LOC108350839 | XP_017448593.1 |
None |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5648 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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