DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and betB

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_414846.1 Gene:betB / 947376 ECOCYCID:EG10110 Length:490 Species:Escherichia coli


Alignment Length:493 Identity:166/493 - (33%)
Similarity:265/493 - (53%) Gaps:16/493 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SALVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSL 88
            |.:.:.:..:.|.:..:::.: |||..|||||.|:..|......|..:|:.:|:|.  .|.|.|:
E. coli     2 SRMAEQQLYIHGGYTSATSGR-TFETINPANGNVLATVQAAGREDVDRAVKSAQQG--QKIWASM 63

  Fly    89 TAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINE-SKGEVAYGNAFVEWFAEEARRIYGEIV 152
            ||.:||.:|::...::.:.:.|:|::.|.::||..:| |..::..|...:|::|.....:.|   
E. coli    64 TAMERSRILRRAVDILRERNDELAKLETLDTGKAYSETSTVDIVTGADVLEYYAGLIPALEG--- 125

  Fly   153 PSASPNRE---IIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVA 214
             |..|.||   :...::|:||.|.|..||:|:.:...|:..|||||..::.||||.||||||.:|
E. coli   126 -SQIPLRETSFVYTRREPLGVVAGIGAWNYPIQIALWKSAPALAAGNAMIFKPSEVTPLTALKLA 189

  Fly   215 KLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNS-ADGIKRICLEL 278
            ::..:||:|.||.||: ....|..|....:.|.:..:||||....||.:..|| |..:|.:.:||
E. coli   190 EIYSEAGLPDGVFNVL-PGVGAETGQYLTEHPGIAKVSFTGGVASGKKVMANSAASSLKEVTMEL 253

  Fly   279 GGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDG 343
            ||.:|.||||.||::.|.|.||.:.|.:.||.|.:..|.||.......|..::..|||.::.||.
E. coli   254 GGKSPLIVFDDADLDLAADIAMMANFFSSGQVCTNGTRVFVPAKCKAAFEQKILARVERIRAGDV 318

  Fly   344 QGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKG---SLFYAPTIVTDVPPSAQL 405
            .......|||::....:.|..::...:.:.|.::.||..|...|   ..:.|||:.||......:
E. coli   319 FDPQTNFGPLVSFPHRDNVLRYIAKGKEEGARVLCGGDVLKGDGFDNGAWVAPTVFTDCSDDMTI 383

  Fly   406 YSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISA 470
            ..||:||||:||:.:..|:|.:::||||..|||....:.:|.:..||..:||.|:..:|....|.
E. coli   384 VREEIFGPVMSILTYESEDEVIRRANDTDYGLAAGIVTADLNRAHRVIHQLEAGICWINTWGESP 448

  Fly   471 AEAPFGGVKESGVGREGSKHGIDDYVDIKYICMGNLKY 508
            ||.|.||.|.||:|||.....:..|..:|.|.:...|:
E. coli   449 AEMPVGGYKHSGIGRENGVMTLQSYTQVKSIQVEMAKF 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 160/461 (35%)
betBNP_414846.1 PRK13252 1..490 CDD:183918 166/493 (34%)

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