DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and paaZ

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_415905.1 Gene:paaZ / 945954 ECOCYCID:G6708 Length:681 Species:Escherichia coli


Alignment Length:527 Identity:123/527 - (23%)
Similarity:209/527 - (39%) Gaps:99/527 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LSGVARTGSSLSLCRMRGFSALVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADA 69
            |||..::|        ||.|.|:......:..|      :.|.|..:.|             |..
E. coli     8 LSGTWQSG--------RGRSRLIHHAISGEALW------EVTSEGLDMA-------------AAR 45

  Fly    70 QKAIDAAKQAYESKEWRSLTAKDRSNLLKKWHK-LIEQHSQEIAEIMTAESGKPINESKGEVAYG 133
            |.||:....|.     |::|..:|:.:||...| |:.:..:..|  ::|::|....:|..::..|
E. coli    46 QFAIEKGAPAL-----RAMTFIERAAMLKAVAKHLLSEKERFYA--LSAQTGATRADSWVDIEGG 103

  Fly   134 NAFVEWFAEEARRIY--------GEIVPSASPN----REIIVMKQPIGVAALITPWNFPMAMITR 186
            ...:..:|....|..        .|::|.:...    |.::..|.  |||..|..:|||...:..
E. coli   104 IGTLFTYASLGSRELPDDTLWPEDELIPLSKEGGFAARHLLTSKS--GVAVHINAFNFPCWGMLE 166

  Fly   187 KAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAG-IPKGVINVVTTNKAAPIGDLF--CKSPDV 248
            |.......|...::||:..|.....|:.|..||:| :|:|.|:::    ....|||.  ..|.||
E. coli   167 KLAPTWLGGMPAIIKPATATAQLTQAMVKSIVDSGLVPEGAISLI----CGSAGDLLDHLDSQDV 227

  Fly   249 RGISFTGSTEVGKLL------------FRNSADGIKRICLELGGNAPFIVFDSADIEKAVDGAMA 301
              ::||||...|::|            |...||.:.  |..||.:   :..|..:....:...:.
E. coli   228 --VTFTGSAATGQMLRVQPNIVAKSIPFTMEADSLN--CCVLGED---VTPDQPEFALFIREVVR 285

  Fly   302 SKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFV 366
            ......||.|.:..|..|..::.:.....|..|::.:.:||.....|::|.|:|..|...|...|
E. coli   286 EMTTKAGQKCTAIRRIIVPQALVNAVSDALVARLQKVVVGDPAQEGVKMGALVNAEQRADVQEKV 350

  Fly   367 EDARSKKANIILGGQPLPDKGSLFYAPTIV----TDVPPSAQLYSEEVFGPVVSIIRFRDEEEAV 427
            ....:....|.||||........|:.||::    .|..|:  :::.|.||||.:::..:::..|:
E. coli   351 NILLAAGCEIRLGGQADLSAAGAFFPPTLLYCPQPDETPA--VHATEAFGPVATLMPAQNQRHAL 413

  Fly   428 KKANDTRRGLAGYFYSENLQ-------QVFRVAKRLEVGMVGVNEGIISAAE-----APFGGVKE 480
            :.|......|||...:.:.|       ...|...|:::    :||.  ||.|     :|...:..
E. coli   414 QLACAGGGSLAGTLVTADPQIARQFIADAARTHGRIQI----LNEE--SAKESTGHGSPLPQLVH 472

  Fly   481 SGVGREG 487
            .|.||.|
E. coli   473 GGPGRAG 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 112/483 (23%)
paaZNP_415905.1 PaaN-DH 4..674 CDD:131331 123/527 (23%)

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