DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and patD

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_415961.1 Gene:patD / 945876 ECOCYCID:G6755 Length:474 Species:Escherichia coli


Alignment Length:478 Identity:173/478 - (36%)
Similarity:258/478 - (53%) Gaps:11/478 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 VQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAK 91
            :|.|.|::|..|.....|.  .|.|||.|.|:.::...:......|:.||..|:  .||...|.|
E. coli     1 MQHKLLINGELVSGEGEKQ--PVYNPATGDVLLEIAEASAEQVDAAVRAADAAF--AEWGQTTPK 61

  Fly    92 DRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINES-KGEV-AYGNAFVEWFAEEARRIYGEIVPS 154
            .|:..|.|...:||::.|..||:.:...|||::.: ..|: |..:.| .:||..||.:.|.....
E. coli    62 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVF-RFFAGAARCLNGLAAGE 125

  Fly   155 ASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVD 219
            .......::.:.|:||.|.|.|||:|:.|...|...|||||..||:||||.||||||.:|:||.|
E. coli   126 YLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD 190

  Fly   220 AGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGNAPF 284
            . .|.||||:: ..:...:||.....|.||.:|.|||...|:.:..::|..|||..:||||.||.
E. coli   191 I-FPAGVINIL-FGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTASSIKRTHMELGGKAPV 253

  Fly   285 IVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQ 349
            ||||.||||..|:|.....:.|.||.|.:|.|.:.|..:||..|.:|...|..||.|.......:
E. coli   254 IVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTE 318

  Fly   350 IGPLINEMQFNKVSGFVEDARSK-KANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGP 413
            :|||.:.....:|...||:|::. ...:|.||:.....| .:||||::........:..:|||||
E. coli   319 LGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG-YYYAPTLLAGALQDDAIVQKEVFGP 382

  Fly   414 VVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGV 478
            |||:..|.:||:.|..|||::.|||...:::::.:..||:.||:.|...||...:..:|.|.||.
E. coli   383 VVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQ 447

  Fly   479 KESGVGREGSKHGIDDYVDIKYI 501
            |.||.|::.|.:|::||..::::
E. coli   448 KLSGYGKDMSLYGLEDYTVVRHV 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 167/456 (37%)
patDNP_415961.1 ABALDH 2..473 CDD:132417 173/477 (36%)

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