DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and aldA

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_415933.1 Gene:aldA / 945672 ECOCYCID:EG10035 Length:479 Species:Escherichia coli


Alignment Length:487 Identity:176/487 - (36%)
Similarity:269/487 - (55%) Gaps:22/487 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SALVQDKALVDG--------AWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAY 80
            |..||....:||        ||:|         |.|||..|||.::|:....||:||||||::| 
E. coli     2 SVPVQHPMYIDGQFVTWRGDAWID---------VVNPATEAVISRIPDGQAEDARKAIDAAERA- 56

  Fly    81 ESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAFVEWFAEEAR 145
             ..||.:|.|.:|::.|:|....|.:.:.||:.::..|.||....::.|||:...::::.||.||
E. coli    57 -QPEWEALPAIERASWLRKISAGIRERASEISALIVEEGGKIQQLAEVEVAFTADYIDYMAEWAR 120

  Fly   146 RIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTA 210
            |..|||:.|..|...|::.|:.:||...|.|||||..:|.||...||..|.|:|:||||.||..|
E. coli   121 RYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185

  Fly   211 LAVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRIC 275
            :|.||:..:.|:|:||.|:| ..:...:|.....:|.|..:|.|||...|:.:...:|..|.::|
E. coli   186 IAFAKIVDEIGLPRGVFNLV-LGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAAKNITKVC 249

  Fly   276 LELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKI 340
            |||||.||.||.|.||:|.||...:.|:..|.||.|..|.|.:||..:||:||.:|.:.::|::.
E. coli   250 LELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQF 314

  Fly   341 GD-GQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQ 404
            |: .:..|:.:|||||.....:|...|..|..:.|.:..||:.:..|| .:|.||::.||.....
E. coli   315 GNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKG-YYYPPTLLLDVRQEMS 378

  Fly   405 LYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIIS 469
            :..||.||||:.::.|...|:|:..|||:..||....|::||....:..|.|:.|...:|.....
E. coli   379 IMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFE 443

  Fly   470 AAEAPFGGVKESGVGREGSKHGIDDYVDIKYI 501
            |.:....|.::||:|....|||:.:|:..:.:
E. coli   444 AMQGFHAGWRKSGIGGADGKHGLHEYLQTQVV 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 168/454 (37%)
aldANP_415933.1 PRK10090 72..479 CDD:182233 146/406 (36%)

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