DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and UGA2

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_009560.1 Gene:UGA2 / 852291 SGDID:S000000210 Length:497 Species:Saccharomyces cerevisiae


Alignment Length:482 Identity:218/482 - (45%)
Similarity:311/482 - (64%) Gaps:5/482 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTA 90
            |.::...:||.||..::  ..|||.:||:|.:|.:||...|:..::|||.|.:.:  |.:::.|.
Yeast    16 LFRESGYIDGKWVKGTD--EVFEVVDPASGEIIARVPEQPVSVVEEAIDVAYETF--KTYKNTTP 76

  Fly    91 KDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAFVEWFAEEARRIYGEIVPSA 155
            ::|:..|:..:.|:.::..::|.|:|.|:||.:.|:|||:.|..::.||:||||.|:||..:...
Yeast    77 RERAKWLRNMYNLMLENLDDLATIITLENGKALGEAKGEIKYAASYFEWYAEEAPRLYGATIQPL 141

  Fly   156 SPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDA 220
            :|:..:..::||:||..:|.|||||.|||||||.||||.|||||:||...|||:|||:|.||..|
Yeast   142 NPHNRVFTIRQPVGVCGIICPWNFPSAMITRKAAAALAVGCTVVIKPDSQTPLSALAMAYLAEKA 206

  Fly   221 GIPKGVINVVTTNKAAP-IGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGNAPF 284
            |.|||..||:.::...| :|...|:||.|:.::|||||.|||:|.:.|:..:|::..||||||||
Yeast   207 GFPKGSFNVILSHANTPKLGKTLCESPKVKKVTFTGSTNVGKILMKQSSSTLKKLSFELGGNAPF 271

  Fly   285 IVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQ 349
            |||:.||:::|::.|||.|||..|||||.|||.:|..|:.|||...|.:||:...||.|......
Yeast   272 IVFEDADLDQALEQAMACKFRGLGQTCVCANRLYVHSSIIDKFAKLLAERVKKFVIGHGLDPKTT 336

  Fly   350 IGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPV 414
            .|.:||.....||....:||..|.|.::|.|..|.:.|..||||.|::.||.:|.:..||.|||:
Yeast   337 HGCVINSSAIEKVERHKQDAIDKGAKVVLEGGRLTELGPNFYAPVILSHVPSTAIVSKEETFGPL 401

  Fly   415 VSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVK 479
            ..|..|...||.|..||||..|||.|.:|:|:..::.|::.||.|||..|.|:.|....||||||
Yeast   402 CPIFSFDTMEEVVGYANDTEFGLAAYVFSKNVNTLYTVSEALETGMVSCNTGVFSDCSIPFGGVK 466

  Fly   480 ESGVGREGSKHGIDDYVDIKYICMGNL 506
            |||.|||||.:||:||..:|.|.:|||
Yeast   467 ESGFGREGSLYGIEDYTVLKTITIGNL 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 208/454 (46%)
UGA2NP_009560.1 SSADH 37..486 CDD:188167 206/450 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157343989
Domainoid 1 1.000 416 1.000 Domainoid score I78
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H840
Inparanoid 1 1.050 429 1.000 Inparanoid score I277
Isobase 1 0.950 - 0.930827 Normalized mean entropy S643
OMA 1 1.010 - - QHG63174
OrthoFinder 1 1.000 - - FOG0003728
OrthoInspector 1 1.000 - - oto99168
orthoMCL 1 0.900 - - OOG6_102015
Panther 1 1.100 - - LDO PTHR43353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1397
SonicParanoid 1 1.000 - - X2584
TreeFam 1 0.960 - -
1514.740

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