DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and ALDH5F1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_178062.1 Gene:ALDH5F1 / 844282 AraportID:AT1G79440 Length:528 Species:Arabidopsis thaliana


Alignment Length:504 Identity:257/504 - (50%)
Similarity:355/504 - (70%) Gaps:10/504 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RQLSGVARTGSSLSLCRMRGFSALVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVA 67
            ||:|..|::.|.    ::|. |.|::.:.|:.|.|:||.:.| |.:|.|||.|.:|..|..|...
plant    32 RQMSMDAQSVSE----KLRS-SGLLRTQGLIGGKWLDSYDNK-TIKVNNPATGEIIADVACMGTK 90

  Fly    68 DAQKAIDAAKQAYESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAY 132
            :...||.::.:|:.|  |..|||.:||.:|::|:.|:..|.:|:.:::|.|.|||:.|:.|||||
plant    91 ETNDAIASSYEAFTS--WSRLTAGERSKVLRRWYDLLIAHKEELGQLITLEQGKPLKEAIGEVAY 153

  Fly   133 GNAFVEWFAEEARRIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCT 197
            |.:|:|::||||:|:||:|:|....:|.::|:|||:||...|||||||:||||||.|.|||:|||
plant   154 GASFIEYYAEEAKRVYGDIIPPNLSDRRLLVLKQPVGVVGAITPWNFPLAMITRKVGPALASGCT 218

  Fly   198 VVVKPSEDTPLTALAVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKL 262
            |||||||.|||||||.|:||:.||:|.|.:|||..| |..|||....||.||.|:|||||.|||.
plant   219 VVVKPSELTPLTALAAAELALQAGVPPGALNVVMGN-APEIGDALLTSPQVRKITFTGSTAVGKK 282

  Fly   263 LFRNSADGIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKF 327
            |...:|..:|::.||||||||.||||.||::.||.|.:|:||||.|||||.|||..|||.:||||
plant   283 LMAAAAPTVKKVSLELGGNAPSIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRVLVQDGIYDKF 347

  Fly   328 VGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYA 392
            .....:.|:.|::|||.......|||||:....||..||:||.||.|.||:||: ....|..||.
plant   348 AEAFSEAVQKLEVGDGFRDGTTQGPLINDAAVQKVETFVQDAVSKGAKIIIGGK-RHSLGMTFYE 411

  Fly   393 PTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLE 457
            ||::.||..:..:..||:||||..:|||:.||:|::.||||..|||.|.::.::|:.:||.:.||
plant   412 PTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGLAAYIFTNSVQRSWRVFEALE 476

  Fly   458 VGMVGVNEGIISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYICMGNL 506
            .|:||||||:||...|||||||:||:||||||:|:|:|::|||:|:|::
plant   477 YGLVGVNEGLISTEVAPFGGVKQSGLGREGSKYGMDEYLEIKYVCLGDM 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 240/453 (53%)
ALDH5F1NP_178062.1 PLN02278 29..526 CDD:215157 257/504 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 484 1.000 Domainoid score I84
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H840
Inparanoid 1 1.050 502 1.000 Inparanoid score I313
OMA 1 1.010 - - QHG63174
OrthoDB 1 1.010 - - D899961at2759
OrthoFinder 1 1.000 - - FOG0003728
OrthoInspector 1 1.000 - - oto2808
orthoMCL 1 0.900 - - OOG6_102015
Panther 1 1.100 - - LDO PTHR43353
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2584
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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