DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and ALDH2C4

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_566749.1 Gene:ALDH2C4 / 822042 AraportID:AT3G24503 Length:501 Species:Arabidopsis thaliana


Alignment Length:483 Identity:172/483 - (35%)
Similarity:281/483 - (58%) Gaps:19/483 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRS 94
            |..::|.::|:::.| |||..:|.||.||..:......|...|::||:.|::...|..:|..:|:
plant    21 KLFINGQFIDAASGK-TFETIDPRNGEVIATIAEGDKEDVDLAVNAARYAFDHGPWPRMTGFERA 84

  Fly    95 NLLKKWHKLIEQHSQEIAEIMTAESGK--------PINESKGEVAYGNAFVEWFAEEARRIYGEI 151
            .|:.|:..|||::.:|:|::...:.||        .|..:.|...|.       |..|.:|:||.
plant    85 KLINKFADLIEENIEELAKLDAVDGGKLFQLGKYADIPATAGHFRYN-------AGAADKIHGET 142

  Fly   152 VPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKL 216
            :.....:.....:|:||||...|.|||||..|...|...|:|||||:||||:|.|.|:||..|.|
plant   143 LKMTRQSLFGYTLKEPIGVVGNIIPWNFPSIMFATKVAPAMAAGCTMVVKPAEQTSLSALFYAHL 207

  Fly   217 AVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVG-KLLFRNSADGIKRICLELGG 280
            :.:||||.||:|:| |...:..|.......||..:||||||:|| |::...:|..:|::.|||||
plant   208 SKEAGIPDGVLNIV-TGFGSTAGAAIASHMDVDKVSFTGSTDVGRKIMQAAAASNLKKVSLELGG 271

  Fly   281 NAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQG 345
            .:|.::|:.|||:||.|.|:...|.|.|:.||:::|.|||:.:|||.|.:|.::.:...:||...
plant   272 KSPLLIFNDADIDKAADLALLGCFYNKGEICVASSRVFVQEGIYDKVVEKLVEKAKDWTVGDPFD 336

  Fly   346 CDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEV 410
            ...:.||.:::.||.|:..::|..:::.|.::.||:.:.||| .|..|||..||....::|.:|:
plant   337 STARQGPQVDKRQFEKILSYIEHGKNEGATLLTGGKAIGDKG-YFIQPTIFADVTEDMKIYQDEI 400

  Fly   411 FGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPF 475
            ||||:|:::|:..||.:|.||:|:.|||....|:::..:..|::.::.|::.||.......:.|:
plant   401 FGPVMSLMKFKTVEEGIKCANNTKYGLAAGILSQDIDLINTVSRSIKAGIIWVNCYFGFDLDCPY 465

  Fly   476 GGVKESGVGREGSKHGIDDYVDIKYICM 503
            ||.|.||..||.....:|:|:..|.:.|
plant   466 GGYKMSGNCRESGMDALDNYLQTKSVVM 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 164/462 (35%)
ALDH2C4NP_566749.1 PLN02766 1..501 CDD:215410 172/483 (36%)

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