DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and aldh1a3

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001038210.1 Gene:aldh1a3 / 751785 ZFINID:ZDB-GENE-061128-2 Length:513 Species:Danio rerio


Alignment Length:512 Identity:178/512 - (34%)
Similarity:271/512 - (52%) Gaps:33/512 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SGVARTGSSLSLCRMRGFSALVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQ 70
            :|.:|..|...|.:....:.:...|..::..|..||..| .|...|||.|..|..:.....||..
Zfish     9 NGDSRNTSPPPLPQPVKITEIKHTKIFINNEWHTSSKGK-QFPTINPATGVKICDIEEADKADVD 72

  Fly    71 KAIDAAKQA-YESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGN 134
            :|:.|||.| .....||.:.|..|..||.:...|:|:....:|.:.:.::|||         :.:
Zfish    73 EAVKAAKAAGQRGSVWRRMDASSRGRLLNRLADLLERERAVLATLESKDTGKP---------FLH 128

  Fly   135 AF----------VEWFAEEARRIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAG 189
            ||          :.::|....:|:|:.:| ...|.......:||||...|.|||||:.|:..|..
Zfish   129 AFFVDLDGSIKTLRYYAGWTDKIHGKTMP-VDENFVCFTKHEPIGVCGAIIPWNFPLLMLMWKIA 192

  Fly   190 AALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVINVV----TTNKAAPIGDLFCKSPDVRG 250
            .|||.|.|||:||:|.||||||.||.|..:||.|.||:|||    .|..||..|.:     ::..
Zfish   193 PALACGNTVVLKPAEQTPLTALHVAALIKEAGFPPGVVNVVPGFGPTAGAAIAGHM-----NIDK 252

  Fly   251 ISFTGSTEVGKLLFRNSA-DGIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSA 314
            ::||||||||:|:...:| ..:||:.|||||..|.|||..:|::.||:......|.|.||.|.:|
Zfish   253 LAFTGSTEVGQLVKAAAASSNLKRVTLELGGKNPCIVFADSDLQLAVEETQKGAFFNQGQACTAA 317

  Fly   315 NRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILG 379
            :|.:||:.||::||....:|.:.:.|||........||.|::.||.|:...|:..:.:.|.:..|
Zfish   318 SRVYVQEPVYEEFVRLSVERAKNIVIGDPMEPRTSHGPQIDQHQFEKILALVDSGKKEGAKLEFG 382

  Fly   380 GQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSE 444
            |..:.|:| ||..|||.:||....::..||:||||..|::|..:::.:.:||.::.||....::.
Zfish   383 GCAVEDRG-LFIHPTIFSDVKDHMRIAKEEIFGPVQCIMKFECQQDVIDRANSSQFGLTAAVFTR 446

  Fly   445 NLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYI 501
            ::|:...|:..||.|.|.||......|:.||||.|.||.|||..::.:.:|.::|.|
Zfish   447 DVQRAMSVSAALEAGTVWVNCYNALHAQTPFGGYKMSGNGRELGEYALAEYTEVKAI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 168/469 (36%)
aldh1a3NP_001038210.1 ALDH_F1AB_F2_RALDH1 28..506 CDD:143459 174/493 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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