DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh16a1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_666066.1 Gene:Aldh16a1 / 69748 MGIID:1916998 Length:802 Species:Mus musculus


Alignment Length:501 Identity:142/501 - (28%)
Similarity:234/501 - (46%) Gaps:54/501 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 AWVDSSNAKATFEV---------RNPA------NGAVIGKVPNMTVADAQKAIDAAKQAYESKEW 85
            ||:|:.|......|         ||||      .|..:.........|...|::|||.|:  |.|
Mouse    31 AWLDTHNRLLGHHVNGMWLKPEHRNPAPCQDPITGENLASCLQAEAEDIAAAVEAAKIAF--KAW 93

  Fly    86 RSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESK-GEVAYGNAFVEWFAEEARRIYG 149
            ..|....|...|.:..|::::|.:.:..:.:..:|:.:.|.: |:|......:::.|.:|.    
Mouse    94 SQLPGAARGQHLTRLAKVVQKHQRLLWTLESLVTGRAVREVRDGDVPLAQQLLQYHAVQAH---- 154

  Fly   150 EIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVV--VKPSEDTPLTALA 212
                   ...:.:...||:||..||.|..|....:..:...|||.|||||  |.|:..||   |.
Mouse   155 -------AQGDALADWQPVGVIGLILPTPFSFLDMMWRVCPALAMGCTVVALVPPAFPTP---LL 209

  Fly   213 VAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLE 277
            :|:||.:.|...|::|||.  ..|.:|.:....|.|:.::|.|:.|.|::|.|..|.....:.|.
Mouse   210 LAQLAGELGSFPGILNVVC--GPASLGPVLASQPGVQKVAFCGAVEEGRVLRRTLAGRGAELGLA 272

  Fly   278 LGGNAPFIVFDSADIEKAVDGAMASKF--RNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKI 340
            ||..:..::.||||::.||:|.:.:.:  |:.|     ..|..:|:||:|:.:.:|:.|:..::.
Mouse   273 LGTESLLLLMDSADVDSAVEGVVDAVWSDRSLG-----GLRLLIQESVWDEAMRRLQARMAQIRS 332

  Fly   341 GDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQL 405
            |.|....|.:|.. .....:....||::|:|:...:...|. :| ..|.|::|.:|:.:||:|..
Mouse   333 GRGLDGAVDMGAR-GAAARDLAQSFVDEAQSQGGQVFQAGD-VP-SSSPFFSPALVSGLPPAAPC 394

  Fly   406 YSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISA 470
            ...||..|||....||..:||:..||.|.||.:...:||.|.|...:...|:||.|.:|...:..
Mouse   395 AQAEVPWPVVMASPFRTVKEALALANGTPRGGSASVWSERLGQALELGYGLQVGTVWINAHGLRD 459

  Fly   471 AEAPFGGVKESGVGREGSKHGIDDYV-------DIKYICMGNLKYD 509
            ...|.||.||||....|...|:.:|:       ...::| .|:.||
Mouse   460 PAVPTGGCKESGSSWHGGPDGLYEYLQPLGTPSQESFLC-ENINYD 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 134/480 (28%)
Aldh16a1NP_666066.1 ALDH-SF 19..491 CDD:299846 138/485 (28%)
ALDH-SF 527..>765 CDD:299846
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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