DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh3b3

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001419525.1 Gene:Aldh3b3 / 688778 RGDID:1585230 Length:479 Species:Rattus norvegicus


Alignment Length:461 Identity:123/461 - (26%)
Similarity:212/461 - (45%) Gaps:62/461 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PNMTVADAQKAIDAAKQAYESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINES 126
            |:......::.:...|:|:.:  .::..||.|:..|:...:.::.:|:::.:.:..:.||...||
  Rat    10 PDQGTDPFEEKLQRLKEAFNT--GKTKMAKFRAEQLESLGQFLQDNSKQLHDALDGDLGKSAFES 72

  Fly   127 ----------KGEVAYGNAFVEWFAEEARRIYGEIVPSASPN-----REIIVMKQPIGVAALITP 176
                      :.::|..| ...|..:|          |.|.|     ....:.|:|.|:..:|.|
  Rat    73 DMSEIILCQNEVDLALKN-LQTWMKDE----------SVSTNFLTKFSSAFIRKEPFGLVLIIAP 126

  Fly   177 WNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKL----------AVDAGIPKGVINVVT 231
            ||:|:.::......|:|||..||:||||.:..|...:|:|          ||..|.|:       
  Rat   127 WNYPLNLMIMPLVGAIAAGNCVVLKPSEMSKNTEKVLAELLPQYLDQSCFAVVLGGPE------- 184

  Fly   232 TNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGNAPFIVFDSADIEKAV 296
                 ..|.|.....|.  |.||||..|||::...:|..:..|.|||||..|..|.|:.|.:...
  Rat   185 -----ETGQLLKHKFDY--IFFTGSPRVGKIVMAAAAKHLTPITLELGGKNPCYVDDNCDPQTVA 242

  Fly   297 DGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNK 361
            :.....::.|.|||||:.:.......:.::.|..|:..:... .||.......:|.:||:..|.:
  Rat   243 NRVAWFRYFNAGQTCVAPDYVLCSQEMQERLVPALQNAITRF-YGDNPQTSPNLGRIINQKHFER 306

  Fly   362 VSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEA 426
            :.|.:...|     :.:|||  .|:|..:.|||::.||..:..:..||:|||::.::..|:.:||
  Rat   307 LQGLLGCGR-----VAIGGQ--SDEGERYIAPTVLVDVQETEPVMQEEIFGPILPLVTVRNLDEA 364

  Fly   427 VKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGI--ISAAEAPFGGVKESGVGREGSK 489
            ::..|...:.||.|.||.|::.:.:|..|...|....|:|.  ::.:..|||||..||:||...|
  Rat   365 IEFINRREKPLALYAYSNNVEVIKQVLARTSSGSFCGNDGFMHMTLSSLPFGGVGSSGMGRYHGK 429

  Fly   490 HGIDDY 495
            ...|.:
  Rat   430 FSFDTF 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 123/461 (27%)
Aldh3b3NP_001419525.1 ALDH_F3AB 18..460 CDD:143450 122/453 (27%)

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