DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh1l1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_071992.2 Gene:Aldh1l1 / 64392 RGDID:621294 Length:902 Species:Rattus norvegicus


Alignment Length:476 Identity:177/476 - (37%)
Similarity:282/476 - (59%) Gaps:10/476 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRSNLL 97
            :.|.:||:..:| |:...||.:|:||.:|....|:|..||:.|||:|:|:..|..:.|:||..||
  Rat   426 IGGEFVDAEGSK-TYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLL 489

  Fly    98 KKWHKLIEQHSQEIAEIMTAESGKPINES-KGEVAYGNAFVEWFAEEARRIYGEIVP--SASPNR 159
            .:...::|||.:|:|.|...::|.....: |..|........:||....:|.|..:|  .|.|||
  Rat   490 YRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNR 554

  Fly   160 EI-IVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIP 223
            .: :..|:|:||..::.|||:|:.|::.|..|.||||.|||:||::.||||||..|:|.:.||||
  Rat   555 NLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIP 619

  Fly   224 KGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA-DGIKRICLELGGNAPFIVF 287
            |||:|:: ....:.:|......||||.|.|||||||||.:.::.| ..:|::.|||||.:|.|:|
  Rat   620 KGVVNIL-PGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIF 683

  Fly   288 DSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGP 352
            ...|:.|||...|:|.|.|.|:.|::|.|.||::|::::||.::.:.||.:|||:....|...||
  Rat   684 ADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGP 748

  Fly   353 LINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSI 417
            ..:|....|:..:.:....:.|.::.||..:|..| .|:.||:.|||.....:..||.|||::.|
  Rat   749 QNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPG-FFFQPTVFTDVEDHMYIAKEESFGPIMII 812

  Fly   418 IRFRD-EEEAV-KKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKE 480
            .||.| :.:|| .:||.|..|||...::.::.:...|:.:|:.|.|.:|....:...|||||.|:
  Rat   813 SRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQ 877

  Fly   481 SGVGREGSKHGIDDYVDIKYI 501
            ||.|::..:..:::|:.||.:
  Rat   878 SGFGKDLGEAALNEYLRIKTV 898

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 172/460 (37%)
Aldh1l1NP_071992.2 GART 1..203
Substrate binding. /evidence=ECO:0000250 88..90
Aldehyde dehydrogenase 417..902 177/476 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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