DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and P5CDh1

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_649368.2 Gene:P5CDh1 / 40434 FlyBaseID:FBgn0037138 Length:574 Species:Drosophila melanogaster


Alignment Length:592 Identity:153/592 - (25%)
Similarity:253/592 - (42%) Gaps:109/592 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWRQLSGVARTGSSL--SLCR--MRGFSALVQDKALVD---------GAWVDSSNAKATFE-VRN 51
            |.|.:...:...|||  ||.:  .|...:::.|..|.|         |...||...||..: ::.
  Fly     1 MLRMMRSSSSRCSSLQQSLLKSSTRCLGSVIPDLKLKDFPIANEPILGYLKDSKERKALEQALKG 65

  Fly    52 PANGA-----VIG--------------------KVPNMTVADAQKAIDAAKQAYESK-EWRSLTA 90
            .|:..     |||                    |:.:...||.:....|.|.|.|:: :|..::.
  Fly    66 TASSCEDIPIVIGGKEYKTPEVRYQVMPHDHQHKLASFYYADKKLIEKAIKTAVETQPKWDRVSI 130

  Fly    91 KDRSNLLKKWHK----LIEQHSQEI-AEIMTAESGKPINESKGEVAYGNAFVE---WFAEEARRI 147
            .||   ||.|.|    :...:.|:: |..|..:|...|.......|....|:.   :|.:|..: 
  Fly   131 ADR---LKIWEKAADLMATTYRQDLNAATMLGQSKTAIQAEIDSAAELIDFIRMNAYFLKEVTK- 191

  Fly   148 YGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALA-----AGCTVVVKPSEDTP 207
            |..|..:....:..:..:...|..|.::|:||      ...|..|:     .|..|:.|||:...
  Fly   192 YQPISENIKVTKNSLRYRGIDGFIAAVSPFNF------TAIGGNLSYTPALMGNGVLWKPSDTAM 250

  Fly   208 LTALAVAKLAVDAGIPKGVINVVTTNKAAPI-GDLFCKSPDVRGISFTGSTEVGKLLFRNSADGI 271
            |:...:.|:..:||:|.||:|.|..:  .|: ||....||.:.||:||||......|::...:.|
  Fly   251 LSNWIIFKIMREAGVPDGVVNFVPAD--GPVFGDTITASPHLAGINFTGSVPTFNRLWKQVGNNI 313

  Fly   272 ------KRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQ 330
                  .|:..|.||.....:..|||:|..|...:.|.|..|||.|.:.:|.:|.:|::.:....
  Fly   314 DNYVNFPRLTGECGGKNFHFIHASADVESVVTSTIRSAFEYCGQKCSACSRMYVPESLWPQIKEG 378

  Fly   331 LKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANI-ILGGQPLPDKGSLFYAPT 394
            |......|||||.|........:|::..|.:::|::|.|: |..|: ||.|....|....|..||
  Fly   379 LVCEAAKLKIGDVQDFSSFTSAVIDDKAFKRITGYIEHAK-KSPNLEILAGGTYSDSKGYFVNPT 442

  Fly   395 IVTDVPPSAQLYSEEVFGPVVSIIRFRDEE--EAVKKAN-DTRRGLAGYFYSEN-------LQQV 449
            ||....|..::.:||:||||:||..:::.:  |.:|..: .|:..|.|..:.::       ||: 
  Fly   443 IVLSKDPKDRIMTEEIFGPVLSIYVYKESDLLETMKLVHTSTKFALTGAVFGQDEDFVKCALQE- 506

  Fly   450 FRVAKRLEVGMVGVNE---GIISAAEAPFGGVKESGVG-REGSKHGI----------DDYVDIK- 499
            |::|    .|...:|:   |.: ..:.||||.:.||.. :.|..|.|          :.:|.:: 
  Fly   507 FKMA----AGNFYINDKSTGSV-VGQQPFGGGRMSGTNDKAGGPHYILRWTSPQSIKETFVPLRD 566

  Fly   500 ----YIC 502
                |:|
  Fly   567 VNYPYMC 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 137/530 (26%)
P5CDh1NP_649368.2 ALDH_F4-17_P5CDH 41..563 CDD:143441 139/540 (26%)

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