DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and aldh2.1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_956784.1 Gene:aldh2.1 / 393462 ZFINID:ZDB-GENE-040426-1262 Length:516 Species:Danio rerio


Alignment Length:485 Identity:173/485 - (35%)
Similarity:270/485 - (55%) Gaps:25/485 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 DKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKD 92
            :|..::..|.|:. :|.||...|||...||..|.....||..||:.||:.|:: ...||.:.|..
Zfish    36 NKIFINNEWHDAV-SKKTFPTINPATAEVICHVAEGDKADVDKAVKAARDAFKLGSPWRRMDASQ 99

  Fly    93 RSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAF----------VEWFAEEARRI 147
            |..||.:....||:.:..:||:.|.::|||         |..:|          :.::|..|.:.
Zfish   100 RGLLLNRLADCIERDAAYLAELETLDNGKP---------YTLSFCVDLPMVVKCLRYYAGWADKW 155

  Fly   148 YGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALA 212
            .|:.:| ...|.......:||||...|.|||||:.|...|.|.|||.|.|||:|.:|.||||||.
Zfish   156 EGKTIP-IDGNYFCYTRHEPIGVCGQIIPWNFPLLMQALKLGPALATGNTVVMKVAEQTPLTALY 219

  Fly   213 VAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFR-NSADGIKRICL 276
            :|.|..:.|.|.||:|:| .......|.......||..::|||||:||.|:.: :||..:|.:.|
Zfish   220 IASLIKEVGFPAGVVNIV-PGFGPTAGAAIASHMDVDKVAFTGSTDVGHLIQQASSASNLKNVSL 283

  Fly   277 ELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIG 341
            ||||.:|.|:...|::|:||:.|.::.|.|.||.|.:..|.|||:|:||:||.:..:|.:...:|
Zfish   284 ELGGKSPNIILSDANMEEAVEQAHSALFFNQGQCCCAGTRTFVQESIYDEFVERSVERAKNRIVG 348

  Fly   342 DGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLY 406
            |....:.:.||.::|.||.||.|::...:.:.|.::.||.|..::| .|..||:..||.....:.
Zfish   349 DPFDLNTEQGPQVDEDQFKKVLGYISSGKREGAKLMCGGAPAAERG-YFIQPTVFGDVKDDMTIA 412

  Fly   407 SEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAA 471
            .||:||||:.|::|:..||.:::|||::.|||...:::|:.:...::..|..|.|.:|...:...
Zfish   413 REEIFGPVMQILKFKSLEEVIERANDSKYGLAAAVFTQNIDKANYISHGLRAGTVWINCYNVFGV 477

  Fly   472 EAPFGGVKESGVGREGSKHGIDDYVDIKYI 501
            :|||||.|.||:|||..::|:|.|.::|.:
Zfish   478 QAPFGGYKASGIGRELGEYGLDIYTEVKTV 507

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 167/465 (36%)
aldh2.1NP_956784.1 ALDH_F1AB_F2_RALDH1 30..510 CDD:143459 173/485 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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