DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh16a1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001028878.1 Gene:Aldh16a1 / 361571 RGDID:1566295 Length:802 Species:Rattus norvegicus


Alignment Length:497 Identity:142/497 - (28%)
Similarity:234/497 - (47%) Gaps:56/497 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VDGAWVDSSNAKATFEVRNPA------NGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAK 91
            |:|.|:..       |.||||      .|..:.........|...|::||:..:  |.|..|...
  Rat    44 VNGMWLKP-------EHRNPAPCQDPITGENLASCLQAEAEDISAAVEAARITF--KTWSQLPGT 99

  Fly    92 DRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESK-GEVAYGNAFVEWFAEEARRIYGEIVPSA 155
            .|...|.:..|:|::|.:.:..:.:..:|:.:.|.: |::......:.:.|.:|     ....||
  Rat   100 ARGQHLTRLAKVIQKHQRLLWTLESLVTGRAVREVRDGDIPLAQQLLHYHALQA-----HAQDSA 159

  Fly   156 SPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVV--VKPSEDTPLTALAVAKLAV 218
            ..:.|      |:||..||.|.:|....:..:...|||.|||||  |.||..||   |.:|:||.
  Rat   160 LADWE------PLGVIGLILPTSFSFLDMMWRVCPALAMGCTVVALVPPSFPTP---LLLAQLAG 215

  Fly   219 DAGIPKGVINVVTTNKAAPI--GDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGN 281
            :.|...|::|||    ..|:  |.:....|.|:.::|.|:.|.|:.|.:..|.....:.|.||..
  Rat   216 ELGSFPGILNVV----CGPVSLGPVLASQPGVQKVAFCGAVEEGRALRQTLAGRGATLGLALGTE 276

  Fly   282 APFIVFDSADIEKAVDGAMASKF--RNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQ 344
            :..::.||||::.||:|.:.:.:  |:.|     ..|..:|:||:|:.:.:|:.|:..::.|.|.
  Rat   277 SLLLLTDSADVDSAVEGVVDAVWSDRSLG-----GLRLLIQESVWDEAMKRLQARMAQIRSGKGL 336

  Fly   345 GCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEE 409
            ...|.:|.. .....:....||::|:|:...:...|. :| ..|.|::||:|:.:||:|.....|
  Rat   337 DGAVDMGAR-GAAARDLAQSFVDEAQSQGGQVFQAGD-MP-SNSPFFSPTLVSGLPPAAPCAQAE 398

  Fly   410 VFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAP 474
            |..|||....||..:||:..||.|.||.:...:||.|.|...:...|:||.|.:|...:.....|
  Rat   399 VPWPVVMASPFRTVKEALALANGTPRGGSASVWSERLGQALELGYGLQVGTVWINAHGLRDPAVP 463

  Fly   475 FGGVKESGVGREGSKHGIDDYVDI-------KYICMGNLKYD 509
            .||.||||....|...|:.:|:.:       .::| .:|.||
  Rat   464 TGGCKESGSSWHGGPDGLYEYLQLLGTPYRESFLC-ESLNYD 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 134/473 (28%)
Aldh16a1NP_001028878.1 ALDH-SF 19..491 CDD:416387 138/481 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 513..554
ALDH-SF 550..>765 CDD:416387
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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