DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_609285.1 Gene:Aldh / 34256 FlyBaseID:FBgn0012036 Length:520 Species:Drosophila melanogaster


Alignment Length:514 Identity:171/514 - (33%)
Similarity:273/514 - (53%) Gaps:26/514 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VARTGSSLS------LCRMRGFSALVQDK---------ALVDGAWVDSSNAKATFEVRNPANGAV 57
            |.:||:.|.      ...:..:|:|.|.:         ..::..|..|.:.| .||..||....|
  Fly     4 VLKTGALLRSQAKNFAAAVANYSSLPQPQTTPDILYTGVFINNEWHKSKSGK-IFETINPTTAEV 67

  Fly    58 IGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGK 121
            |.::......|...|:.||:.|:: ...||.:.|.:|..||.:...|:|:....:|.:.|.::||
  Fly    68 IAEIQCADKEDIDIAVQAARNAFKLGSPWRRMDASERGRLLYRLADLMERDQVYLASLETLDNGK 132

  Fly   122 PINESKG---EVAYGNAFVEWFAEEARRIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAM 183
            |.:.|..   ..|..|  :.:||..|.:.:|:.:| ...:.......:|:||...|.|||||:.|
  Fly   133 PYSMSYNVDLPTAIKN--LRYFAGWADKNHGKTIP-MDGDFFTYTRHEPVGVCGQIIPWNFPILM 194

  Fly   184 ITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDV 248
            :..|.|.|||.|.|:|:||:|.|.||||.:|:|..:||.|:||:|||.....|  |.......||
  Fly   195 MAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVPGFGTA--GAALANHCDV 257

  Fly   249 RGISFTGSTEVGKLLFRNSAD-GIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCV 312
            ..::|||||:||||:...|.: .:||:.|||||.:|.|:....|::.||:.|....|.|.||.|.
  Fly   258 DKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDMDYAVETAHFGLFFNMGQCCC 322

  Fly   313 SANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANII 377
            :.:|.||:|.:||:||.:..:|.:...:|:....:.:.||.:||.|..|:.|.::..:.:.|.::
  Fly   323 AGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGPQVNEEQMEKILGMIKTGKKQGAKLV 387

  Fly   378 LGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFY 442
            .||.........|..||:..||.....:..||:||||..:|||:..:|.:::||::..|||...:
  Fly   388 AGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVF 452

  Fly   443 SENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYI 501
            :::|.:...:...|..|.|.||...:.||:|||||.|.||.|||..::.:.:|.::|.:
  Fly   453 TKDLDKANYIVGGLRAGTVWVNTYNVLAAQAPFGGYKMSGHGRENGEYALSNYTEVKSV 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 159/458 (35%)
AldhNP_609285.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 164/484 (34%)

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