DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh1l2

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001178707.2 Gene:Aldh1l2 / 299699 RGDID:1309458 Length:923 Species:Rattus norvegicus


Alignment Length:490 Identity:160/490 - (32%)
Similarity:274/490 - (55%) Gaps:28/490 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRS 94
            :..::|.:||:.:.: |:...||.:|..:.:|...::||..:|:.|||.|:|:.||..:.|:||.
  Rat   444 QCFINGQFVDAEDGE-TYATINPTDGTTLCRVSYASLADVDRAVAAAKDAFENGEWGRMNARDRG 507

  Fly    95 NLLKKWHKLIEQHSQEIAEIMTAESGKPINES-KGEVAYGNAFVEWFA------------EEARR 146
            .|:.:...|:|::.:|:|.|...:||.....: |..:........:||            |...|
  Rat   508 RLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQVTKEPENQAR 572

  Fly   147 IYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTAL 211
            |:..:..|:         ::|..|.|:|.|||:|:.|:..|:.|.||||.|:|:||::.||||||
  Rat   573 IHDTLGMSS---------EEPKVVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTAL 628

  Fly   212 AVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA-DGIKRIC 275
            ..|:|.|.||.||||||:: .......|....:.||:|.:.|||||.|||.:.::.| ..:|::.
  Rat   629 KFAELTVKAGFPKGVINII-PGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKVS 692

  Fly   276 LELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKI 340
            |||||.:|.|:|...:::|||...|.:.|.|.|:.|::|.|.||:::::|:||.::.:.::.:||
  Rat   693 LELGGKSPLIIFSDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKI 757

  Fly   341 GDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQL 405
            ||........||..::....|:..:.|....:.|.::.||:.:...| .|..||:.|.|.....|
  Rat   758 GDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPG-FFMEPTVFTGVEDHMYL 821

  Fly   406 YSEEVFGPVVSIIRFR--DEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGII 468
            ..||.|||::.|.:|:  |.:..:::||:|..|||...::.::.:...|:.|||.|.|.:|....
  Rat   822 AKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDISKAMYVSDRLEAGTVFINTYNK 886

  Fly   469 SAAEAPFGGVKESGVGREGSKHGIDDYVDIKYICM 503
            :...|||||||:||.|::..:..:::|:..|.:.:
  Rat   887 TDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTVTL 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 156/469 (33%)
Aldh1l2NP_001178707.2 FMT_core_FDH_N 23..225 CDD:187716
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..>390 CDD:425746
ALDH_F1L_FTFDH 438..923 CDD:143458 160/490 (33%)
Blue background indicates that the domain is not in the aligned region.

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