DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh1l2

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_001178707.2 Gene:Aldh1l2 / 299699 RGDID:1309458 Length:923 Species:Rattus norvegicus


Alignment Length:490 Identity:160/490 - (32%)
Similarity:274/490 - (55%) Gaps:28/490 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRS 94
            :..::|.:||:.:.: |:...||.:|..:.:|...::||..:|:.|||.|:|:.||..:.|:||.
  Rat   444 QCFINGQFVDAEDGE-TYATINPTDGTTLCRVSYASLADVDRAVAAAKDAFENGEWGRMNARDRG 507

  Fly    95 NLLKKWHKLIEQHSQEIAEIMTAESGKPINES-KGEVAYGNAFVEWFA------------EEARR 146
            .|:.:...|:|::.:|:|.|...:||.....: |..:........:||            |...|
  Rat   508 RLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQVTKEPENQAR 572

  Fly   147 IYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTAL 211
            |:..:..|:         ::|..|.|:|.|||:|:.|:..|:.|.||||.|:|:||::.||||||
  Rat   573 IHDTLGMSS---------EEPKVVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTAL 628

  Fly   212 AVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA-DGIKRIC 275
            ..|:|.|.||.||||||:: .......|....:.||:|.:.|||||.|||.:.::.| ..:|::.
  Rat   629 KFAELTVKAGFPKGVINII-PGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKVS 692

  Fly   276 LELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKI 340
            |||||.:|.|:|...:::|||...|.:.|.|.|:.|::|.|.||:::::|:||.::.:.::.:||
  Rat   693 LELGGKSPLIIFSDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMKI 757

  Fly   341 GDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQL 405
            ||........||..::....|:..:.|....:.|.::.||:.:...| .|..||:.|.|.....|
  Rat   758 GDPLDRSTDHGPQNHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPG-FFMEPTVFTGVEDHMYL 821

  Fly   406 YSEEVFGPVVSIIRFR--DEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGII 468
            ..||.|||::.|.:|:  |.:..:::||:|..|||...::.::.:...|:.|||.|.|.:|....
  Rat   822 AKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDISKAMYVSDRLEAGTVFINTYNK 886

  Fly   469 SAAEAPFGGVKESGVGREGSKHGIDDYVDIKYICM 503
            :...|||||||:||.|::..:..:::|:..|.:.:
  Rat   887 TDVAAPFGGVKQSGFGKDLGEEALNEYLKTKTVTL 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 156/469 (33%)
Aldh1l2NP_001178707.2 FMT_core_FDH_N 23..225 CDD:187716
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..>390 CDD:395435
ALDH_F1L_FTFDH 438..923 CDD:143458 160/490 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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