DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssadh and Aldh1a3

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_695212.2 Gene:Aldh1a3 / 266603 RGDID:628662 Length:512 Species:Rattus norvegicus


Alignment Length:495 Identity:180/495 - (36%)
Similarity:268/495 - (54%) Gaps:34/495 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKDR 93
            |..::..|.:|.:.: .|...||:....|.:|......|..||::||:.|:: ...||.|.|..|
  Rat    33 KIFINNDWHESKSGR-KFATYNPSTLEKICEVEEGDKPDVDKAVEAAQAAFQRGSPWRRLDALSR 96

  Fly    94 SNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAF----------VEWFAEEARRIY 148
            ..||.:...|||:....:|.:.|.::|||         :.:||          ..:||..|.:|.
  Rat    97 GQLLHQLADLIERDRAILATLETMDTGKP---------FLHAFFVDLEGCIKTFRYFAGWADKIQ 152

  Fly   149 GEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAV 213
            |..:|: ..|.......:||||...|||||||:.|:..|...||..|.|||:||:|.||||||.:
  Rat   153 GRTIPT-DDNVMCFTRHEPIGVCGAITPWNFPLLMLAWKLAPALCCGNTVVLKPAEQTPLTALYL 216

  Fly   214 AKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFR-NSADGIKRICLE 277
            |.|..:.|.|.||:|:| ......:|......|.:..|:||||||||||:.. .|...:||:.||
  Rat   217 ASLIKEVGFPPGVVNIV-PGFGPTVGAAISSHPQINKIAFTGSTEVGKLVKEAASRSNLKRVTLE 280

  Fly   278 LGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALK--- 339
            |||..|.||...||::.||:.|....|.|.||.|.:|:|.||::.||.:||   ::.||..|   
  Rat   281 LGGRNPCIVCADADLDLAVECAHQGVFFNQGQCCTAASRVFVEEQVYGEFV---RRSVEFAKKRP 342

  Fly   340 IGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQ 404
            :||......:.||.|::.||:|:...:|..:.:.|.:..||..:.|:| ||..||:.:||..:.:
  Rat   343 VGDPFDAKTEQGPQIDQKQFDKILELIESGKKEGAKLECGGSAMEDRG-LFIKPTVFSDVTDNMR 406

  Fly   405 LYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIIS 469
            :..||:||||..|::|::.||.:|:||.|..||....:::||.:..::|..||.|.|.||.....
  Rat   407 IAKEEIFGPVQPILKFKNLEEVIKRANSTDYGLTAAVFTKNLDKALKLASALESGTVWVNCYNAF 471

  Fly   470 AAEAPFGGVKESGVGREGSKHGIDDYVDIKYICMGNLKYD 509
            .|:|||||.|.||.|||..::.:.:|.::|.:   .:|.|
  Rat   472 YAQAPFGGFKMSGNGRELGEYALAEYTEVKTV---TIKLD 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 174/468 (37%)
Aldh1a3NP_695212.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
ALDH_F1AB_F2_RALDH1 26..506 CDD:143459 178/491 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.