DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh3a1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_114178.1 Gene:Aldh3a1 / 25375 RGDID:2088 Length:453 Species:Rattus norvegicus


Alignment Length:464 Identity:128/464 - (27%)
Similarity:218/464 - (46%) Gaps:77/464 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 TVADAQKAIDAAKQAYESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGE 129
            :::|..|   .|::|:.|.:.|||  :.|...|:...::|.::.:.|:..:.::.||        
  Rat     3 SISDTVK---RAREAFNSGKTRSL--QFRIQQLEALQRMINENLKSISGALASDLGK-------- 54

  Fly   130 VAYGNAFVEWFAEEARRI------------YGEIVPSASPNR----EIIVMKQPIGVAALITPWN 178
                |.:..::.|.|..:            :.|..|.|...:    ::.:..:|:||..:|..||
  Rat    55 ----NEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLGVVLVIGAWN 115

  Fly   179 FPMAMITRKAGAALAAGCTVVVKPSEDT----PLTALAVAK-------LAVDAGIPKGVINVVTT 232
            :|..:..:....|:|||..|::||||.:    .|.|..:.:       |.|..|:|:      ||
  Rat   116 YPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQYMDQNLYLVVKGGVPE------TT 174

  Fly   233 NKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGNAPFIVFDSADIEKAVD 297
                   :|..:..|  .|.:||||.|||::...:|..:..:.|||||.:|..|....|::.|..
  Rat   175 -------ELLKERFD--HIMYTGSTAVGKIVMAAAAKHLTPVTLELGGKSPCYVDKDCDLDVACR 230

  Fly   298 GAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQ----IGPLINEMQ 358
            .....||.|.|||||:.:......|:.::.|.:|||.::     |..|.|.:    .|.:||:..
  Rat   231 RIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLK-----DFYGEDAKQSRDYGRIINDRH 290

  Fly   359 FNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDE 423
            |.:|.|.:::.:     :..||  ..|:.|.:.||||:.||.|.:.:..||:||||:.|:..|..
  Rat   291 FQRVKGLIDNQK-----VAHGG--TWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSL 348

  Fly   424 EEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGI--ISAAEAPFGGVKESGVGRE 486
            |||::..|...:.||.|.:|.|.:.:.::......|.|..|:.|  |:....|||||..||:|..
  Rat   349 EEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVHITVPTLPFGGVGNSGMGAY 413

  Fly   487 GSKHGIDDY 495
            ..|...:.:
  Rat   414 HGKKSFETF 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 128/464 (28%)
Aldh3a1NP_114178.1 ALDH_F3AB 5..447 CDD:143450 128/462 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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