DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh1a1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_038949786.1 Gene:Aldh1a1 / 24188 RGDID:2087 Length:520 Species:Rattus norvegicus


Alignment Length:489 Identity:181/489 - (37%)
Similarity:278/489 - (56%) Gaps:31/489 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKDR 93
            |..::..|.||.:.| .|.|.|||...||..|.....||..||:.||:||:: ...||::.|.:|
  Rat    41 KIFINNEWHDSVSGK-KFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASER 104

  Fly    94 SNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAF----------VEWFAEEARRIY 148
            ..||.|...|:|:....:|.|.....||         .:.||:          :::.|..|.:|:
  Rat   105 GRLLNKLADLMERDRLLLATIEAINGGK---------VFANAYLSDLGGSIKALKYCAGWADKIH 160

  Fly   149 GEIVPSASPNREIIVM--KQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTAL 211
            |:.:||   :.:|...  ::||||...|.|||||:.|...|.|.||:.|.||||||:|.||||||
  Rat   161 GQTIPS---DGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTAL 222

  Fly   212 AVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA--DGIKRI 274
            .:|.|..:||.|.||:|:| .......|.......||..::|||||:||||: :.:|  ..:||:
  Rat   223 HMASLIKEAGFPPGVVNIV-PGYGPTAGAAISSHMDVDKVAFTGSTQVGKLI-KEAAGKSNLKRV 285

  Fly   275 CLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALK 339
            .|||||.:|.|||..||::.||:.|....|.:.||.||:|:|.||::||||:||.:..:|.:...
  Rat   286 TLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYV 350

  Fly   340 IGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQ 404
            :|:.....:..||.|::.|.:|:...:|..:.:.|.:..||....:|| .|..||:.::|....:
  Rat   351 LGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKG-FFVQPTVFSNVTDEMR 414

  Fly   405 LYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIIS 469
            :..||:||||..|::|:..::.:|:||:|..|||...::::|.:...|:..|:.|:|.||..:|.
  Rat   415 IAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMIL 479

  Fly   470 AAEAPFGGVKESGVGREGSKHGIDDYVDIKYICM 503
            :|:.||||.|.||.|||..:||:.:|.::|.:.|
  Rat   480 SAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAM 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 174/468 (37%)
Aldh1a1XP_038949786.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 181/489 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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