DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh1a1

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_038949786.1 Gene:Aldh1a1 / 24188 RGDID:2087 Length:520 Species:Rattus norvegicus


Alignment Length:489 Identity:181/489 - (37%)
Similarity:278/489 - (56%) Gaps:31/489 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKDR 93
            |..::..|.||.:.| .|.|.|||...||..|.....||..||:.||:||:: ...||::.|.:|
  Rat    41 KIFINNEWHDSVSGK-KFPVLNPATEEVICHVEEGDKADVDKAVKAARQAFQIGSPWRTMDASER 104

  Fly    94 SNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAF----------VEWFAEEARRIY 148
            ..||.|...|:|:....:|.|.....||         .:.||:          :::.|..|.:|:
  Rat   105 GRLLNKLADLMERDRLLLATIEAINGGK---------VFANAYLSDLGGSIKALKYCAGWADKIH 160

  Fly   149 GEIVPSASPNREIIVM--KQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTAL 211
            |:.:||   :.:|...  ::||||...|.|||||:.|...|.|.||:.|.||||||:|.||||||
  Rat   161 GQTIPS---DGDIFTFTRREPIGVCGQIIPWNFPLLMFIWKIGPALSCGNTVVVKPAEQTPLTAL 222

  Fly   212 AVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA--DGIKRI 274
            .:|.|..:||.|.||:|:| .......|.......||..::|||||:||||: :.:|  ..:||:
  Rat   223 HMASLIKEAGFPPGVVNIV-PGYGPTAGAAISSHMDVDKVAFTGSTQVGKLI-KEAAGKSNLKRV 285

  Fly   275 CLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALK 339
            .|||||.:|.|||..||::.||:.|....|.:.||.||:|:|.||::||||:||.:..:|.:...
  Rat   286 TLELGGKSPCIVFADADLDIAVEFAHHGVFYHQGQCCVAASRIFVEESVYDEFVRKSVERAKKYV 350

  Fly   340 IGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQ 404
            :|:.....:..||.|::.|.:|:...:|..:.:.|.:..||....:|| .|..||:.::|....:
  Rat   351 LGNPLTQGINQGPQIDKEQHDKILDLIESGKKEGAKLECGGGRWGNKG-FFVQPTVFSNVTDEMR 414

  Fly   405 LYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIIS 469
            :..||:||||..|::|:..::.:|:||:|..|||...::::|.:...|:..|:.|:|.||..:|.
  Rat   415 IAKEEIFGPVQQIMKFKSIDDVIKRANNTTYGLAAGVFTKDLDRAITVSSALQAGVVWVNCYMIL 479

  Fly   470 AAEAPFGGVKESGVGREGSKHGIDDYVDIKYICM 503
            :|:.||||.|.||.|||..:||:.:|.::|.:.|
  Rat   480 SAQCPFGGFKMSGNGRELGEHGLYEYTELKTVAM 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 174/468 (37%)
Aldh1a1XP_038949786.1 ALDH_F1AB_F2_RALDH1 34..514 CDD:143459 181/489 (37%)

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