DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and Aldh1l2

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_705771.2 Gene:Aldh1l2 / 216188 MGIID:2444680 Length:923 Species:Mus musculus


Alignment Length:491 Identity:166/491 - (33%)
Similarity:281/491 - (57%) Gaps:10/491 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 MRGFSALVQDKALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKE 84
            :.|.:..:..:..::|.:||:.:.: |:...||.:|..|.:|...::||..:|:.|||.|:|:.|
Mouse   434 VNGMTVKIPYQCFINGQFVDAEDGE-TYATVNPTDGTTICRVSYASLADVDRAVAAAKDAFENGE 497

  Fly    85 WRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINES-KGEVAYGNAFVEWFAEEARRIY 148
            |..:.|:||..|:.:...|:|::.:|:|.|...:||.....: |..:........:||....:|.
Mouse   498 WGRMNARDRGRLMYRLADLMEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDKIQ 562

  Fly   149 GEIVP--SASPNREI-IVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTA 210
            |..:|  .|.||..: ...|:|:|..|:|.|||:|:.|:..|:.|.||||.|:|:||::.|||||
Mouse   563 GSTIPINQARPNYNLTFTKKEPLGACAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTA 627

  Fly   211 LAVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA-DGIKRI 274
            |..|:|.|.||.||||||:: .......|....:.||:|.:.|||||.|||.:.::.| ..:|::
Mouse   628 LKFAELTVKAGFPKGVINII-PGSGGVAGQRLSQHPDIRKLGFTGSTSVGKQIMKSCAVSNLKKV 691

  Fly   275 CLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALK 339
            .|||||.:|.|:|...|:||||...|.:.|.|.|:.|::|.|.||:::::|:||.::.:.::.:|
Mouse   692 SLELGGKSPLIIFSDCDLEKAVRMGMGAVFFNKGENCIAAGRLFVEEAIHDEFVTRVVEEIKKMK 756

  Fly   340 IGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQ 404
            |||........||..:.....|:..:.|....:.|.::.||:.:...| .|..||:.|.|.....
Mouse   757 IGDPLDRSTDHGPQNHRAHLEKLLQYCETGVQEGATLVYGGRQVQRPG-FFMEPTVFTGVEDHMY 820

  Fly   405 LYSEEVFGPVVSIIRFR--DEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGI 467
            |..||.|||::.|.:|:  |.:..:::||:|..|||...::.::.:...|:.:||.|.|.:|...
Mouse   821 LAKEESFGPIMVISKFQNGDIDGVLQRANNTEYGLASGVFTRDINKAMYVSDKLEAGTVFINTYN 885

  Fly   468 ISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYICM 503
            .:...|||||:|:||.|::..:..:::|:.||.:.:
Mouse   886 KTDVAAPFGGMKQSGFGKDLGEEALNEYLKIKTVTL 921

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 161/460 (35%)
Aldh1l2NP_705771.2 Fmt 22..326 CDD:223301
FMT_core_FDH_N 23..225 CDD:187716
GART 23..225
FDH_Hydrolase_C 228..327 CDD:187731
PP-binding 346..410 CDD:278949
ALDH_F1L_FTFDH 438..923 CDD:143458 165/487 (34%)
Aldehyde dehydrogenase 438..923 165/487 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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