DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and alh-2

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_503467.2 Gene:alh-2 / 187001 WormBaseID:WBGene00000108 Length:514 Species:Caenorhabditis elegans


Alignment Length:498 Identity:174/498 - (34%)
Similarity:275/498 - (55%) Gaps:13/498 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 SSLSLCRMRGFSALVQD------KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQK 71
            :|:..|...|....:.|      ...::..:||:.:.| |||..|||||.::.||......|...
 Worm    12 ASVQACNGSGLPPGLADFKPKYTSLFINNEFVDAKSGK-TFEFVNPANGKLLAKVAEGNRDDVDI 75

  Fly    72 AIDAAKQAYE-SKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIMTAESGKPINESKG-EVAYGN 134
            |::|||:|:: ..|||.:.|..|..||.:...|:|:....:|.:.:.::|||..|:.. ::....
 Worm    76 AVEAAKKAFKIGSEWRRMDASHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAYNIDLPISI 140

  Fly   135 AFVEWFAEEARRIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVV 199
            ....::|..|.:.:|:.:| ...:.......:|:||...|.|||||:.|...|...|||.|.|||
 Worm   141 KTFRYYAGYADKNHGKTIP-VGGDYFTYTRHEPVGVCGQIIPWNFPLLMQAWKLAPALAMGNTVV 204

  Fly   200 VKPSEDTPLTALAVAKLAVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLF 264
            :|.:..|||:||.||.|..:|..|:||:|:: ..:....|:......||..::|||||||||.:.
 Worm   205 MKVAVKTPLSALHVASLIKEAQFPEGVVNII-PGRGTDAGEAIASHMDVDKVAFTGSTEVGKTIM 268

  Fly   265 RNSAD-GIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFV 328
            :.:|: .:|::.|||||.:|.|||..||:|:||..:..:.|.|.||.|.:.:|.||:..:||:||
 Worm   269 KAAAESNVKKVTLELGGKSPNIVFADADLEEAVRQSHHALFFNQGQCCSAGSRTFVEGKIYDEFV 333

  Fly   329 GQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAP 393
            .:.|:.||...|||....:...||.|:|.|...:..::|..:.:.|.::.||....|:| .|..|
 Worm   334 AKAKELVEKTVIGDPFDENTTQGPQIDESQVETIMKYIESGKKEGAQLVTGGVKHGDQG-YFVKP 397

  Fly   394 TIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEV 458
            ||..:|....::..||:||||:.:|||...||.::|||:|..|||....:.:|.:..:||..:..
 Worm   398 TIFANVNDQMKIAQEEIFGPVMIVIRFDSMEELIEKANNTIYGLAAGVVTNDLNKALQVANTIRA 462

  Fly   459 GMVGVNEGIISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYI 501
            |.|.||...:....|||||.|:||:|||..::|:..|.::|.:
 Worm   463 GSVWVNCYDVFDPAAPFGGFKQSGIGRELGEYGLAAYTEVKTV 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 164/456 (36%)
alh-2NP_503467.2 ALDH_F1-2_Ald2-like 34..507 CDD:143410 170/476 (36%)

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