DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and alh-10

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_509203.1 Gene:alh-10 / 180979 WormBaseID:WBGene00000116 Length:506 Species:Caenorhabditis elegans


Alignment Length:468 Identity:158/468 - (33%)
Similarity:242/468 - (51%) Gaps:29/468 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 NPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRSNLLKKWHKLIEQHSQEIAEIM 115
            ||:.|....|:|:.|..:..:|::|||:|:  |.|:..|.:.||.||.|...|||:.:.:||.:.
 Worm    47 NPSTGKPWIKIPDGTAREVDQAVEAAKEAF--KTWKKTTVQQRSALLNKVANLIEEFNDDIAILE 109

  Fly   116 TAESGKPINESKGEVAYGNAFVEWFAEEARRIYGEIVPSA---SPNREII--VMKQPIGVAALIT 175
            :.:.||||..:|  |......|:.|.:.|......:..|.   .|..:.:  |...|:|||.||:
 Worm   110 SRDQGKPIGLAK--VMDIPRCVQNFRDFANAALYSLSTSTILEQPTGKFVNYVKNDPVGVAGLIS 172

  Fly   176 PWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIPKGVIN-VVTTNKAAPIG 239
            |||.|:.:::.|...||.||.|||.||||.|.:||..:.......|.|.||:| |:...|:|  |
 Worm   173 PWNLPLYLLSFKLAPALVAGNTVVCKPSEMTSVTAWVLMHAFKLVGFPPGVVNMVIGEGKSA--G 235

  Fly   240 DLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGNAPFIVF------DSADIEKAVDG 298
            .......||..|||||||.:||.:..:.|...|::.||:||..|.||:      |.|.|.:    
 Worm   236 QRLVDHVDVPLISFTGSTVIGKKIQEDGAKLNKKVSLEMGGKNPGIVYSNYRKSDIASIAR---- 296

  Fly   299 AMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVS 363
               |.|.|.|:.|:..:|.|||..::..||....:..:...:|| ....||||.:.:::.:.||.
 Worm   297 ---SSFLNQGEICLCTSRLFVQKPIFADFVKSYVEEAKKFTVGD-PTTQVQIGAMNSKVHYEKVK 357

  Fly   364 GFVEDARSKKANIILGGQPLPDKG---SLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEE 425
            .::|.|:.:.|:|:.||......|   ..|..||::..:..::::.::|:|||||.|..|...||
 Worm   358 SYIELAKKEGADILCGGVTTIQNGCENGYFITPTVIVGLHDASKVMTDEIFGPVVCITPFDTAEE 422

  Fly   426 AVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKESGVGREGSKH 490
            .:::||.|..||:...:|.:..::...|..|..|.|..|..:......||||.|:||.||||...
 Worm   423 VIERANSTPYGLSATVWSSDSDELLNTANELRAGTVWCNTWLARDLSMPFGGCKQSGNGREGLHD 487

  Fly   491 GIDDYVDIKYICM 503
            .:..|.|.|.:|:
 Worm   488 SLHFYSDAKTVCV 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 157/466 (34%)
alh-10NP_509203.1 ALDH_F8_HMSADH 45..500 CDD:143412 157/466 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D899961at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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