DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and alh-5

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_503545.1 Gene:alh-5 / 178680 WormBaseID:WBGene00000111 Length:437 Species:Caenorhabditis elegans


Alignment Length:457 Identity:131/457 - (28%)
Similarity:221/457 - (48%) Gaps:52/457 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 VADAQKA---IDAAKQAYESKE----WRSLTAKDRSNLLK-KWHKLIEQHSQEIAEIMTAESGKP 122
            :.:||:|   ..|.|.|...||    .:.|..::|:.|.: .|..|..:|  |:.|.|      .
 Worm     6 IVEAQRAYFNTGATKPAEFRKEQLLQLKKLIEENRAALTEVVWKDLRRRH--EVTEPM------E 62

  Fly   123 INESKGEVAYGNAFVEWFAEEARRIYGEIVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRK 187
            :..|..|:||   :::...:..:..|.|...:..|..:..::|.|.||..:|:|||:|::|:...
 Worm    63 LGGSLEEIAY---YLKNLDDWMKPTYVEPTVATLPTDKPYIVKDPKGVVLVISPWNYPVSMVLLP 124

  Fly   188 AGAALAAGCTVVVKPSEDTPLTALAVAKL-----------AVDAGIPKGVINVVTTNKAAPIGDL 241
            ...::|||.|:|:||||.:..||:...||           .|:.|||:      ||       :|
 Worm   125 MIPSIAAGNTIVIKPSELSENTAILFEKLIPKYFDPKYVTIVNGGIPE------TT-------EL 176

  Fly   242 FCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLELGGNAPFIVFDSADIEKAVDGAMASKFRN 306
            ..:..|  .|.:||...|.|::...:|..:..:.|||||..|.:|.|.||||.:.......|:.|
 Worm   177 LKERFD--HIIYTGCPPVAKIIMAAAAKHLTPVTLELGGKCPVVVEDDADIEISAQRIARGKWLN 239

  Fly   307 CGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGPLINEMQFNKVSGFVEDARS 371
            |||||::.:...|..:...|||..::|.::....|:.:. ......:||:..|:::|..::::  
 Worm   240 CGQTCLAPDYILVSSATKPKFVAAIQKCLKEFYGGNAKE-SKDYSRVINQRHFDRISALLDES-- 301

  Fly   372 KKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRG 436
             |..::.|.:...|:...|..||:: ||..:.....:|:||||:.||..::..|::...|...:.
 Worm   302 -KGVVLAGNEESRDRSDRFIPPTVL-DVEKTDPFMHDEIFGPVLPIITVKNLCESIDFINKGEKP 364

  Fly   437 LAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAA--EAPFGGVKESGVGREGSKHGIDDYVDIK 499
            ||.|.::::..:|.|.......|.|.||:.|:..|  ..|||||..||:||...|.|.|.:...|
 Worm   365 LAAYIFTKDEAKVQRFLNETTSGGVTVNDVIMHVAVITLPFGGVGVSGMGRYRGKFGFDTFTHEK 429

  Fly   500 YI 501
            .:
 Worm   430 SV 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 131/457 (29%)
alh-5NP_503545.1 ALDH_F3-13-14_CALDH-like 6..433 CDD:143406 131/457 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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