DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ssadh and alh-3

DIOPT Version :10

Sequence 1:NP_651408.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_502054.2 Gene:alh-3 / 177999 WormBaseID:WBGene00000109 Length:908 Species:Caenorhabditis elegans


Alignment Length:476 Identity:185/476 - (38%)
Similarity:288/476 - (60%) Gaps:10/476 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRSNLL 97
            :||.:|.||:.: ||:..|||....|.::|..||||..:|:.|||:|:|..|||.::|::|...|
 Worm   432 IDGKFVGSSDGR-TFKTINPATEKPICELPLATVADVDRAVRAAKKAFERGEWRQMSARERGKRL 495

  Fly    98 KKWHKLIEQHSQEIAEIMTAESGKPINES-KGEVAYGNAFVEWFAEEARRIYGEIVP--SASPNR 159
            .|..:|:|:|.:|:|.:.:.::|.....: |..|........:||....:|.|:.:|  :|.||:
 Worm   496 YKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGWCDKIQGKTIPISNARPNK 560

  Fly   160 EI-IVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKLAVDAGIP 223
            .: :.:::||||..||||||:|:.|::.|..|.||||.|||.||::.||||||..|:|:|.||||
 Worm   561 NLCLTLREPIGVVGLITPWNYPLMMLSWKMAACLAAGNTVVHKPAQVTPLTALKFAELSVLAGIP 625

  Fly   224 KGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSA-DGIKRICLELGGNAPFIVF 287
            .||||:| |...:.:|:.....||||.|.||||||:|..:..:.| ..||::.|||||.:|.|:|
 Worm   626 PGVINIV-TGSGSLVGNRLTAHPDVRKIGFTGSTEIGATVMESCAKSNIKKVSLELGGKSPLIIF 689

  Fly   288 DSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDGQGCDVQIGP 352
            ..||:||||..|..:.|.|.|:.|::|.|.|:..|::|.||.:|.:..:..:|||........||
 Worm   690 ADADLEKAVKQACGAVFFNKGENCIAAGRVFIAKSIHDDFVKKLVEEAKQYQIGDPLDRSTAHGP 754

  Fly   353 LINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSEEVFGPVVSI 417
            ..:....||:..:||.|.:..|.:.:||:.|..:| |::.|||::::.......|||.|||::.:
 Worm   755 QNHLAHLNKLVEYVEKAVAGGAKVEVGGKRLEREG-LYFPPTILSNIDDENFAASEESFGPIMCV 818

  Fly   418 IRFRDE--EEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEAPFGGVKE 480
            ..|.|:  |:.:::||||..|||...::.:..:..|||:.|..|.|.||....:...|||||.|:
 Worm   819 SSFDDDDIEDVLRRANDTEFGLAAGVFTRDSSKSLRVAEALHAGTVFVNTYQKTDVAAPFGGFKQ 883

  Fly   481 SGVGREGSKHGIDDYVDIKYI 501
            ||.|::..:..:::|:..|.|
 Worm   884 SGFGKDMGEEALNEYLVTKTI 904

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_651408.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 178/460 (39%)
alh-3NP_502054.2 FMT_core_FDH_N 1..209 CDD:187716
FDH_Hydrolase_C 214..315 CDD:187731
PP-binding 335..393 CDD:425746
ALDH-SF 423..908 CDD:448367 185/476 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.