DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and aldh1a2

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:NP_571925.1 Gene:aldh1a2 / 116713 ZFINID:ZDB-GENE-011010-3 Length:518 Species:Danio rerio


Alignment Length:485 Identity:166/485 - (34%)
Similarity:260/485 - (53%) Gaps:23/485 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 KALVDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKDR 93
            |..::..|.||.:.| .|...|||.|..|..|.....||..||:.||:.|:. ...||.:.|.:|
Zfish    39 KIFINNEWHDSVSGK-VFPTYNPATGEKICDVQEADKADVDKAVQAARSAFSLGSVWRKMDASER 102

  Fly    94 SNLLKKWHKLIEQHSQEIAEIMTAESGKP-----INESKGEVAYGNAFVEWFAEEARRIYGEIVP 153
            ..||.|...|:|:.|..:|.:.:.:||||     ..:.:|.:.....:..|    |.:|:|..:|
Zfish   103 GKLLFKLADLVERDSAYLATLESLDSGKPFLPCFFVDLQGIIKTFRYYAGW----ADKIHGSTIP 163

  Fly   154 SASPNREIIVM--KQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKL 216
            .   :.|...:  .:||||...|.|||||:.|...|.|.||:.|.|||:||:|.||||.|.:..|
Zfish   164 I---DGEFFTLTRHEPIGVCGQIIPWNFPLVMTAWKLGPALSCGNTVVLKPAEQTPLTCLYLGAL 225

  Fly   217 AVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADG---IKRICLEL 278
            ..:||.|.||:|:: .......|........:..::||||||||||:  ..|.|   :||:.|||
Zfish   226 IKEAGFPPGVVNIL-PGYGPTAGAAISSHMGIDKVAFTGSTEVGKLI--QEAAGKSNLKRVTLEL 287

  Fly   279 GGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDG 343
            ||.:|.|:|..||.|.|::.|....|.|.||.|.:.:|.||::.:||:||.:..:|.:..|:|:.
Zfish   288 GGKSPNIIFADADFELALEQAHQGVFFNNGQCCTAGSRIFVEEPIYDEFVRRSVERAQRRKVGNP 352

  Fly   344 QGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYSE 408
            .....:.||.::|.|..:|...::...::.|.:..||:....|| .|..||:.::|....::..|
Zfish   353 FDPTTEHGPQVSEEQQRRVLELIQSGITEGAKLECGGKAPATKG-FFVEPTVFSNVKDHMRIAKE 416

  Fly   409 EVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAEA 473
            |:||||..|::|:..||.:::||:|..|||...::.::.:...::..::.|.|.:|.....:.:.
Zfish   417 EIFGPVQQIMKFKTIEEVIERANNTEYGLAAAVFTRDISKAMTISAAVQAGTVWINCYNAMSCQC 481

  Fly   474 PFGGVKESGVGREGSKHGIDDYVDIKYICM 503
            ||||.|.||.|||..:.|:.:|.::|.|.|
Zfish   482 PFGGFKMSGNGRELGEIGLKEYTELKTITM 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 159/464 (34%)
aldh1a2NP_571925.1 ALDH_F1AB_F2_RALDH1 32..512 CDD:143459 166/485 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1012
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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