DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and aldh8a1

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_002935852.1 Gene:aldh8a1 / 100487000 XenbaseID:XB-GENE-479741 Length:486 Species:Xenopus tropicalis


Alignment Length:489 Identity:166/489 - (33%)
Similarity:256/489 - (52%) Gaps:39/489 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYESKEWRSLTAKDRSNLL 97
            |||.:|.   ..:..:..|||.|.|..:||:....:...|:.:||.|:.:  |.|.:.::||.:|
 Frog    13 VDGKFVP---CNSYIDSINPATGEVYCRVPDSGKQEVDAAVLSAKAAFPA--WSSKSPQERSTIL 72

  Fly    98 KKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAFV------------EWFAEEARRIYGE 150
            .|...|||...:|:|...:.:.||.|           ||.            .:||........|
 Frog    73 YKLADLIESCLEELAVAESKDQGKTI-----------AFARTVDIPRSVYNFRFFASAILHYTTE 126

  Fly   151 IVPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAK 215
            .............::.|:|||.||:|||.|:.::|.|...|:|.|.|||.||||.|.:||..:.|
 Frog   127 CTQMDGLACMHYTVRTPVGVAGLISPWNLPLYLLTWKIAPAIAFGNTVVAKPSEMTSVTAWMMCK 191

  Fly   216 LAVDAGIPKGVINVV--TTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFRNSADGIKRICLEL 278
            |..:||:|.||:|:|  |..:|   |:.....|||..|||||||...:.:...||...|::.|||
 Frog   192 LLKEAGVPPGVVNIVFGTGPRA---GEALVCHPDVPIISFTGSTVTAQRIIEKSAPYCKKLSLEL 253

  Fly   279 GGNAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALKIGDG 343
            ||..|.|:|:.|::|:.::..:.|.|.|.|:.|:..:|.:||.::||.|:.:..:..:..|:|..
 Frog   254 GGKNPAIIFEDANLEECINTTVRSSFSNQGEICLCTSRIYVQKTIYDVFLKRFVEVTKKWKVGAP 318

  Fly   344 QGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILG------GQPLPDKGSLFYAPTIVTDVPPS 402
            ......:|.||:.....||..:|:.|..:.|.::.|      ..||.:||..|..||::|.:..|
 Frog   319 SEPTASMGALISASHLEKVRSYVKKALEEGATVLCGEGVNALDVPLKNKGGFFMLPTVITGLKES 383

  Fly   403 AQLYSEEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGI 467
            :....||:||||..|:.|..|||.::|||..:.|||...::.::.:|.||||:|..|:|..|..:
 Frog   384 SCCMQEEIFGPVTCIVPFDSEEEVIEKANGVKYGLAATVWTRDVGRVHRVAKKLHSGLVWTNCWL 448

  Fly   468 ISAAEAPFGGVKESGVGREGSKHGIDDYVDIKYI 501
            |.....||||:|.||:||||:|...:.:.::|.|
 Frog   449 IRDLNLPFGGMKASGLGREGTKDSYEFFTEVKTI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 162/473 (34%)
aldh8a1XP_002935852.1 ALDH_F8_HMSADH 26..484 CDD:143412 162/473 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D899961at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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