DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ssadh and aldh1a3

DIOPT Version :9

Sequence 1:NP_001014665.1 Gene:Ssadh / 43092 FlyBaseID:FBgn0039349 Length:509 Species:Drosophila melanogaster
Sequence 2:XP_002939310.1 Gene:aldh1a3 / 100485844 XenbaseID:XB-GENE-992885 Length:512 Species:Xenopus tropicalis


Alignment Length:484 Identity:173/484 - (35%)
Similarity:264/484 - (54%) Gaps:31/484 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VDGAWVDSSNAKATFEVRNPANGAVIGKVPNMTVADAQKAIDAAKQAYE-SKEWRSLTAKDRSNL 96
            ::..|..|.:.: ||.|.|||.|..|.:|.....||..||::||:.|:: ...||.|.|..|..|
 Frog    36 INNEWHKSVSGR-TFAVFNPATGKKICEVEEADKADVDKAVEAARAAFQRGSAWRRLDANGRGRL 99

  Fly    97 LKKWHKLIEQHSQEIAEIMTAESGKPINESKGEVAYGNAF----------VEWFAEEARRIYGEI 151
            |.|...|:|:....:|.:.:.::|||         :.:||          :.:||....:|.|:.
 Frog   100 LHKLGDLLERDRVLLATLESMDTGKP---------FLHAFLIDLEGCIRTLRYFAGWTDKIQGKT 155

  Fly   152 VPSASPNREIIVMKQPIGVAALITPWNFPMAMITRKAGAALAAGCTVVVKPSEDTPLTALAVAKL 216
            :| ...:.....:.:||||...|||||||:.|:..|.|.||..|.|:|:||:|.||||:|.:..|
 Frog   156 IP-VDDSFLCFTVHEPIGVCGAITPWNFPLLMLIWKMGPALCCGNTLVIKPAEQTPLTSLHIGSL 219

  Fly   217 AVDAGIPKGVINVVTTNKAAPIGDLFCKSPDVRGISFTGSTEVGKLLFR-NSADGIKRICLELGG 280
            ..:||.|.||:|:| .......|......||:..|:||||||||||:.. .|...:||:.|||||
 Frog   220 IKEAGFPPGVVNIV-PGYGPTAGSAISHHPDIDKIAFTGSTEVGKLIKEAASRSNLKRVTLELGG 283

  Fly   281 NAPFIVFDSADIEKAVDGAMASKFRNCGQTCVSANRFFVQDSVYDKFVGQLKKRVEALK---IGD 342
            ..|.|||..:|:|.||:.|....|.|.||.|.:|:|.||::|:|.:||   ::.:|..|   :||
 Frog   284 KNPCIVFADSDLELAVECAHQGVFFNQGQCCTAASRVFVEESIYPEFV---RRSIEHAKRRFVGD 345

  Fly   343 GQGCDVQIGPLINEMQFNKVSGFVEDARSKKANIILGGQPLPDKGSLFYAPTIVTDVPPSAQLYS 407
            ......:.||.|::.||:|:...::..:.:.|.:..||..:.::| .|..||:.::|....::..
 Frog   346 PFDPRTEQGPQIDQDQFDKILELIQSGKEEGAKLECGGSAVGERG-FFIKPTVFSEVTDDMRIAK 409

  Fly   408 EEVFGPVVSIIRFRDEEEAVKKANDTRRGLAGYFYSENLQQVFRVAKRLEVGMVGVNEGIISAAE 472
            ||:||||.||::||..|:.:|:||....||....::.:|.:...||..|:.|.|.||.......:
 Frog   410 EEIFGPVQSILKFRCLEDVIKRANSLEYGLTAAVFTRSLDKALTVASALQSGTVWVNCYNALHTQ 474

  Fly   473 APFGGVKESGVGREGSKHGIDDYVDIKYI 501
            .||||.|.||.|||..::.:.:|.::|.|
 Frog   475 TPFGGFKMSGNGRELGEYALAEYTEVKTI 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SsadhNP_001014665.1 ALDH_F5_SSADH_GabD 49..503 CDD:143421 169/468 (36%)
aldh1a3XP_002939310.1 ALDH_F1AB_F2_RALDH1 26..506 CDD:143459 173/484 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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