Sequence 1: | NP_001303432.1 | Gene: | CG5071 / 43090 | FlyBaseID: | FBgn0039347 | Length: | 680 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006249190.1 | Gene: | Trim50 / 288596 | RGDID: | 631346 | Length: | 484 | Species: | Rattus norvegicus |
Alignment Length: | 391 | Identity: | 87/391 - (22%) |
---|---|---|---|
Similarity: | 136/391 - (34%) | Gaps: | 105/391 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 IQVPKELKSLLSCGLCHRPYDLATGLLPQELACRHSFCKKCVQRNTDHNSSECICNLCGYRTQLD 68
Fly 69 GQQLPQSVTIMYLLRELPALILGRAMLDFSYKRSSTIEMSIEEAPSSPSKNWVEDINVESFLATS 133
Fly 134 AEHCFIHAMPNSTWCHNCQRLLCRACSDVPLHQDHILV------------------------RQV 174
Fly 175 DYHDLISQLLNSELRKIKSTAVHAKELATHEMDLLRELCEACYRVQLHVKR--EMLEHHSSMVAA 237
Fly 238 SMI--------GWHRL--AERDLHRVGRLTGAKMLQVLAHLATQRQRYE--RQLDQVHFQCRMQA 290
Fly 291 AIQENGMQVLDFETLNNRIARLRSHRRPGAI---PANVGPPQALILTNYCVYAYWCEMQREMIPP 352
Fly 353 R 353 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5071 | NP_001303432.1 | RING | 16..59 | CDD:238093 | 14/42 (33%) |
cyclophilin | 514..674 | CDD:294131 | |||
Trim50 | XP_006249190.1 | RING | 15..60 | CDD:238093 | 17/51 (33%) |
BBOX | 90..125 | CDD:237988 | 10/34 (29%) | ||
iSH2_PI3K_IA_R | 134..>225 | CDD:304922 | 21/99 (21%) | ||
SPRY_PRY_TRIM50 | 283..471 | CDD:293977 | 11/54 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 47 | 1.000 | Inparanoid score | I5392 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.050 |