DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5071 and TRIM35

DIOPT Version :9

Sequence 1:NP_001303432.1 Gene:CG5071 / 43090 FlyBaseID:FBgn0039347 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_741983.2 Gene:TRIM35 / 23087 HGNCID:16285 Length:493 Species:Homo sapiens


Alignment Length:586 Identity:116/586 - (19%)
Similarity:185/586 - (31%) Gaps:201/586 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 KELKSLLSCGLCHRPY-DLATGLLPQELACRHSFCKKCVQRNTDHNSSECICNLCGYRTQLDGQQ 71
            :..|..|.|.:|:.|: |..|      |.|.|:||:.||.|..:...|. .|.:|..|..     
Human    13 RSFKEELLCAVCYDPFRDAVT------LRCGHNFCRGCVSRCWEVQVSP-TCPVCKDRAS----- 65

  Fly    72 LPQSVTIMYLLRELPALILGRAMLDFSYKRSSTIEMSIEEAPSSPSKNWVEDINVESFLATS--- 133
             |..:...:.|..|...:|.                  |||..:   .|           ||   
Human    66 -PADLRTNHTLNNLVEKLLR------------------EEAEGA---RW-----------TSYRF 97

  Fly   134 AEHCFIHAMPNSTWCHNCQRLLCRACSDVPLHQDHILVRQVD-YHDLISQLLNSELRKIKSTAVH 197
            :..|.:|....|.:|...:.|||.:|...|.||.|.:....| .||..::..|.|         |
Human    98 SRVCRLHRGQLSLFCLEDKELLCCSCQADPRHQGHRVQPVKDTAHDFRAKCRNME---------H 153

  Fly   198 AKELATHEMDLLRELCEACYRVQLHVKREMLEHHSSMVAASMIGWHRLAERDLHRVGRLTGAKML 262
            |          |||..:|.:.::.  ..|.:..|:.:.||.:.|..|.....|....|:....:|
Human   154 A----------LREKAKAFWAMRR--SYEAIAKHNQVEAAWLEGRIRQEFDKLREFLRVEEQAIL 206

  Fly   263 QVLAHLATQRQRYERQLDQVHFQCRMQAAIQENGMQVLDFETLNNRIARLRSH----RRPGAIPA 323
            ..:|....|:|..   .|:...|...:..:..:.::.|..|...:.::.|..|    ||      
Human   207 DAMAEETRQKQLL---ADEKMKQLTEETEVLAHEIERLQMEMKEDDVSFLMKHKSRKRR------ 262

  Fly   324 NVGPPQALILTNYCVYAYWCEMQREMIPPRHRNLTPDPELLPEPRRAVVPPHFNNSLREVELLDY 388
                             .:|.|:                  |||    |.|..        |:|.
Human   263 -----------------LFCTME------------------PEP----VQPGM--------LIDV 280

  Fly   389 VQQIELEQFR-------TLSQPPYDGSHESSSSPNSSSSTNSQSNYIALDTEYGLRELVRQLQQQ 446
            .:.:...|:|       ::...|:      |..||:::...|.|:.:...|.:|.|         
Human   281 CKYLGSLQYRVWKKMLASVESVPF------SFDPNTAAGWLSVSDDLTSVTNHGYR--------- 330

  Fly   447 PQQVQQEQQQQQQQVHQLTHSIYQPDAILVNSVEPQLIGQQSHDHHRQDGGTSS-SVSIVRQPIV 510
               ||.|..::           :.....|:.|   ::..|.||......||..| .|.:||    
Human   331 ---VQVENPER-----------FSSAPCLLGS---RVFSQGSHAWEVALGGLQSWRVGVVR---- 374

  Fly   511 HCYPIYFLDMEIAGELAGRVLIEVRSDAAPRMADNFGALVRHERGYGYRGCTVFQAWGGESIITG 575
                                   ||.|:.   |:.......|:...|:......|...|:..:|.
Human   375 -----------------------VRQDSG---AEGHSHSCYHDTRSGFWYVCRTQGVEGDHCVTS 413

  Fly   576 D 576
            |
Human   414 D 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5071NP_001303432.1 RING 16..59 CDD:238093 14/43 (33%)
cyclophilin 514..674 CDD:294131 10/63 (16%)
TRIM35NP_741983.2 RING-HC_TRIM35_C-IV 18..62 CDD:319513 17/50 (34%)
RING-HC finger (C3HC4-type) 21..60 CDD:319513 15/45 (33%)
Bbox_SF 96..139 CDD:381767 12/42 (29%)
DUF4200 151..247 CDD:372763 23/119 (19%)
SPRY_PRY_TRIM35 303..482 CDD:293950 33/174 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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