DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5071 and cyn-4

DIOPT Version :9

Sequence 1:NP_001303432.1 Gene:CG5071 / 43090 FlyBaseID:FBgn0039347 Length:680 Species:Drosophila melanogaster
Sequence 2:NP_496337.1 Gene:cyn-4 / 174674 WormBaseID:WBGene00000880 Length:523 Species:Caenorhabditis elegans


Alignment Length:311 Identity:57/311 - (18%)
Similarity:109/311 - (35%) Gaps:74/311 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 HFNNSLREV-----ELLD-----YVQQIELEQFRTL-----SQPPYDGSHESSSSP--------N 416
            |..:.|.:|     :::|     ::::..:|||..:     :........::...|        |
 Worm   143 HLKDLLTDVPFTRADIIDLQDPNHLEKFNMEQFLHVKLDLKTSEEIKKEKDAMKDPKFYIRRMNN 207

  Fly   417 SSSSTNSQSNYIALDTEYGLRELVRQLQQQPQQVQQEQQQQQQQVHQLTHSIYQPDAILVNSVEP 481
            :..|...|     ||.||..::...:..:...::......|.:.....|.::..|    |.|.:.
 Worm   208 ACKSVLDQ-----LDKEYVPKKSSTETDETADEINAAHYSQGKVAAGFTSTVMAP----VTSNKA 263

  Fly   482 QLIGQQSHDHHRQDGGTSSSVSIVRQPIVHCYPIYFLDMEIAGELAGRVLIEVRSDAAPRMADNF 546
            .::          |..|.....:.:...|.....:           |.:.:|:.:...|:..:||
 Worm   264 AVL----------DNDTVRYSRVKKNAFVRLVTNF-----------GPLNLELFAPKVPKACENF 307

  Fly   547 GALVRHERGYGYRGCTVFQAWGGESIITGDFESQNGRGGHSAFESRYFLPDE--TGLPAH--RGT 607
               :.| ...||...|.|.......::.|...:..|.||.|.::..:  .||  :|. :|  ||.
 Worm   308 ---ITH-CSNGYYNNTKFHRLIKNFMLQGGDPTGTGHGGESIWDKPF--SDEFISGF-SHDARGV 365

  Fly   608 VGM-RRGQRRQDRSGFVGSQFRLVLNEMRSFT---AIFGFIVQGIELVDRI 654
            :.| .:|      |...||||.:.....:...   .|||.:|.|.:.:..|
 Worm   366 LSMANKG------SNTNGSQFFITFRPCKYLDRKHTIFGRLVGGQDTLTTI 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5071NP_001303432.1 RING 16..59 CDD:238093
cyclophilin 514..674 CDD:294131 34/149 (23%)
cyn-4NP_496337.1 Ubox 45..96 CDD:128780
cyclophilin_RING 281..440 CDD:238904 35/154 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0652
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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