DRSC/TRiP Functional Genomics Resources

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Protein Alignment msi and ZCRB1

DIOPT Version :10

Sequence 1:NP_733108.2 Gene:msi / 43087 FlyBaseID:FBgn0011666 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_149105.3 Gene:ZCRB1 / 85437 HGNCID:29620 Length:217 Species:Homo sapiens


Alignment Length:223 Identity:52/223 - (23%)
Similarity:83/223 - (37%) Gaps:74/223 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 LSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITF----- 251
            :|||..  |:...::|..|.:..:::.|...|:.:|.|..|.||||..|::|:|..||.|     
Human     1 MSGGLA--PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDS 63

  Fly   252 QEPCT--------VEKVLKVPIHTLDGKKID---------------------PKHATPKNR---- 283
            .:.||        ..:|:|..|...:|:..:                     ..:|.|||.    
Human    64 AQNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYACPKNMLGER 128

  Fly   284 --PRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENED-VV 345
              |::..|.||         ..|.|         |.||...:.:.:.           |.|| .:
Human   129 EPPKKKEKKKK---------KKAPE---------PEEEIEEVEESED-----------EGEDPAL 164

  Fly   346 DRVCE-IHFHTIKNKKVECKKAQPKEAV 372
            |.:.: |.|...|.:: |.||.:|...|
Human   165 DSLSQAIAFQQAKIEE-EQKKWKPSSGV 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msiNP_733108.2 RRM_SF 204..278 CDD:473069 23/107 (21%)
RRM2_MSI 292..365 CDD:240769 14/74 (19%)
ZCRB1NP_149105.3 RRM_ZCRB1 9..84 CDD:409827 21/74 (28%)
PTZ00368 <97..123 CDD:173561 2/25 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..217 24/102 (24%)

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