Protein Alignment msi and HRP1

DIOPT Version :9

• Sequence 1: NP_001247303.1
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_014518.1
• Gene: HRP1 / 853997
• SGDID: S000005483
• Length: 534
• Species: Saccharomyces cerevisiae
• Alignment Length: 441
• Identity: 136/441 - (30%)
• Similarity: 203/441 - (46%)
• Gaps: 85/441 - (19%)

  Fly    93 QALVASI-------ANNSVAAIGGGLTTAAVLKSAAQQSQQAVQQNQNAVVVTPGLEQPKQEPAQ 150
            |||.:|:       :|||.:......|:::.....|...:.:.:..:|         :.|||.|.
Yeast    46 QALSSSLNKLNNPNSNNSSSNNSNQDTSSSKQDGTANDKEGSNEDTKN---------EKKQESAT 101

  Fly   151 QAALALLKENVNASAGAGQNNG------QAAMGGSNKSGSSG------------RSTPSLSGGSG 197
            .|       |.||:|.:...:|      |..|....:..|..            ||...||..|
Yeast   102 SA-------NANANASSAGPSGLPWEQLQQTMSQFQQPSSQSPPQQQVTQTKEERSKADLSKES- 158

  Fly   198 SDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLK 262
                 .|:|:|||:|.|:.|.|:|||..:|||||:.|||||.|.|||||||::|::|.:|::|:|
Yeast   159 -----CKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEVVK 218

  Fly   263 VPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQ 327
            .. |.||||.||||.|.|::   :.:||.||||||:..|...:|.:.:|||:|.:.:..:::|:.
Yeast   219 TQ-HILDGKVIDPKRAIPRD---EQDKTGKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKD 279

  Fly   328 TKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQKRIMLGTLGVQL 392
            |.:.|||||||:::.|.|||||:..|...|::|:|.|:|:|:       .:.||....|
Yeast   280 TGQSRGFGFVTYDSADAVDRVCQNKFIDFKDRKIEIKRAEPR-------HMQQKSSNNG------ 331

  Fly   393 PTAPGQLIGARGAGVATMNPL-AMLQNPT----QLLQSPAAAAAAQQAALISQNPFQVQNAAAAA 452
            ....|..:..||......... .|.|||.    ..:.:|.|.....|.   .|..:|
Yeast   332 GNNGGNNMNRRGGNFGNQGDFNQMYQNPMMGGYNPMMNPQAMTDYYQK---MQEYYQ-------- 385

  Fly   453 SIANQAGFGKLLTTYPQTALHSVRYAPYSIPASAATANAALMQAHQAQSVA 503
            .:..|.|.     .|.|.....::.....:|..|...||..:...|..|.|
Yeast   386 QMQKQTGM-----DYTQMYQQQMQQMAMMMPGFAMPPNAMTLNQPQQDSNA 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_001247303.1	RRM1_hnRNPA_hnRNPD_like	205..276	CDD:240771	41/70 (59%)
		RRM2_MSI	292..365	CDD:240769	31/72 (43%)
HRP1	NP_014518.1	PABP-1234	<144..463	CDD:130689	113/327 (35%)
		RRM1_Hrp1p	161..236	CDD:409991	44/75 (59%)
		RRM2_Hrp1p	244..321	CDD:409767	33/76 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	83	1.000	Domainoid score	I1934
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	1	1.000	-	-		otm46847
orthoMCL	1	0.900	-	-		OOG6_101082
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X310
TreeFam	1	0.960	-	-
	8	7.670