Protein Alignment msi and AT1G17640

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_173208.1
• Gene: AT1G17640 / 838341
• AraportID: AT1G17640
• Length: 369
• Species: Arabidopsis thaliana
• Alignment Length: 206
• Identity: 83/206 - (40%)
• Similarity: 121/206 - (58%)
• Gaps: 9/206 - (4%)

  Fly   169 QNNGQAAMGGSNKSGSSGRSTPSLSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVL 233
            :.||.||:   :..|...:.:......|.|..:||||||||:||:|:::....||..||.|.|.:
plant    35 RRNGGAAV---DTGGIQMKHSVDHRHSSSSMSSPGKLFVGGVSWETTAETFANYFGKFGEVVDSV 96

  Fly   234 IMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHATPKNRP----RQANKTKKIF 294
            ||.|.:|...|||||:||.:....||||:.. |.:|.:|:|.|...|:...    :..:||:|||
plant    97 IMTDRITGNPRGFGFVTFADSAVAEKVLEED-HVIDDRKVDLKRTLPRGDKDTDIKAVSKTRKIF 160

  Fly   295 VGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRV-CEIHFHTIKN 358
            |||:......:|:|.||..:|.:.|..::.|..|.|.||||||||:.||.|||: .:...|.:.:
plant   161 VGGLPPLLEEDELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQTEDSVDRLFSDGKVHELGD 225

  Fly   359 KKVECKKAQPK 369
            |:||.|:|:||
plant   226 KQVEIKRAEPK 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	35/73 (48%)
		RRM2_MSI	292..365	CDD:240769	32/73 (44%)
AT1G17640	NP_173208.1	RRM_SF	68..138	CDD:473069	33/70 (47%)
		RRM_SF	158..236	CDD:473069	34/77 (44%)