Sequence 1: | NP_001247303.1 | Gene: | msi / 43087 | FlyBaseID: | FBgn0011666 | Length: | 634 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001331843.1 | Gene: | AT5G55550 / 835649 | AraportID: | AT5G55550 | Length: | 507 | Species: | Arabidopsis thaliana |
Alignment Length: | 453 | Identity: | 115/453 - (25%) |
---|---|---|---|
Similarity: | 191/453 - (42%) | Gaps: | 142/453 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHT 267
Fly 268 LDGK-----------------------------------------------KIDPKHATPKN--- 282
Fly 283 -RPRQAN-------------KTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRG 333
Fly 334 FGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAAQL---LQKRIMLGTLGVQLPT- 394
Fly 395 ------APG---------------QLIGA-RGA----GVATMNPLAMLQNPT-----------QL 422
Fly 423 LQSP--AAAAAAQQAALISQN----PFQVQNAAAAASIANQAGFGKLLTTYPQTALHSVRYAPYS 481
Fly 482 IPASAATAN------------------------AALMQAHQAQSVAAAAHHHQQQQQQQHHHQ 520 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
msi | NP_001247303.1 | RRM1_hnRNPA_hnRNPD_like | 205..276 | CDD:240771 | 31/117 (26%) |
RRM2_MSI | 292..365 | CDD:240769 | 35/72 (49%) | ||
AT5G55550 | NP_001331843.1 | None |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I2908 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000417 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1160 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101082 | |
Panther | 1 | 1.100 | - | - | O | PTHR48032 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X310 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
9 | 8.770 |