Protein Alignment msi and AT5G47620

DIOPT Version :9

• Sequence 1: NP_001247303.1
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001190485.1
• Gene: AT5G47620 / 834812
• AraportID: AT5G47620
• Length: 453
• Species: Arabidopsis thaliana
• Alignment Length: 335
• Identity: 98/335 - (29%)
• Similarity: 165/335 - (49%)
• Gaps: 56/335 - (16%)

  Fly   204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTL 268
            |||:||:||:||.|:|::||:.||.|.:.:||||..|.|:|||||:.|.:|...|:|:.:. |.:
plant     7 KLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLLK-HII 70

  Fly   269 DGK----------------------KIDPKHATPKNRPRQANK-------------TKKIFVGGV 298
            |||                      .::.|.|.|::.....||             :|||||||:
plant    71 DGKILVDSIVYNQLCRSDKCISLSEVVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGL 135

  Fly   299 SQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVEC 363
            :...:..|.|.||:|||.:.:.|::.|.:|:|.|||||:::::|:.||:|.:..||.:..|.||.
plant   136 ASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEV 200

  Fly   364 KKAQPKEAVTPAAQLLQKRIMLGTLGVQLPTAPGQLIGARGAGVATMNPLAMLQNPTQLLQSPAA 428
            |.|.||:.   |...::.::.:.:.|.   :....|:.....|.:. :|::......::..|||.
plant   201 KLAVPKDM---ALNTMRNQMNVNSFGT---SRISSLLNEYTQGFSP-SPISGYGVKPEVRYSPAV 258

  Fly   429 AAAAQQAAL-------ISQNPFQVQNAAAAASIANQAGFGKLLTTYPQTALHSVRYAPYSIPASA 486
            ......:..       ::..|.|.||..:.:|    .|||:..:  |..|....|:........|
plant   259 GNRGGFSPFGHGYGIELNFEPNQTQNYGSGSS----GGFGRPFS--PGYAASLGRFGSQMESGGA 317

  Fly   487 ATANAALMQA 496
            :..|.:::.|
plant   318 SVGNGSVLNA 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_001247303.1	RRM1_hnRNPA_hnRNPD_like	205..276	CDD:240771	34/92 (37%)
		RRM2_MSI	292..365	CDD:240769	31/72 (43%)
AT5G47620	NP_001190485.1	RRM_SF	8..73	CDD:302621	32/65 (49%)
		RRM2_DAZAP1	126..205	CDD:240773	34/78 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	82	1.000	Domainoid score	I2908
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		mtm1160
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR48032
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	7	6.870