Sequence 1: | NP_001247303.1 | Gene: | msi / 43087 | FlyBaseID: | FBgn0011666 | Length: | 634 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_567753.1 | Gene: | AT4G26650 / 828772 | AraportID: | AT4G26650 | Length: | 455 | Species: | Arabidopsis thaliana |
Alignment Length: | 201 | Identity: | 82/201 - (40%) |
---|---|---|---|
Similarity: | 119/201 - (59%) | Gaps: | 25/201 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 196 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 260
Fly 261 LKVPIHTLDGKKIDPKHATPKN----RPRQAN----------------KTKKIFVGGVSQDTSAE 305
Fly 306 EVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKE 370
Fly 371 --AVTP 374 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
msi | NP_001247303.1 | RRM1_hnRNPA_hnRNPD_like | 205..276 | CDD:240771 | 30/70 (43%) |
RRM2_MSI | 292..365 | CDD:240769 | 33/72 (46%) | ||
AT4G26650 | NP_567753.1 | RRM1_hnRNPA_hnRNPD_like | 17..87 | CDD:240771 | 30/70 (43%) |
RRM2_DAZAP1 | 120..199 | CDD:240773 | 37/78 (47%) | ||
RRM | <121..280 | CDD:223796 | 42/87 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I2908 |
eggNOG | 1 | 0.900 | - | - | E1_KOG4205 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000417 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1160 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101082 | |
Panther | 1 | 1.100 | - | - | O | PTHR48032 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X310 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
10 | 9.770 |