Protein Alignment msi and CP33

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_190806.1
• Gene: CP33 / 824403
• AraportID: AT3G52380
• Length: 329
• Species: Arabidopsis thaliana
• Alignment Length: 344
• Identity: 77/344 - (22%)
• Similarity: 139/344 - (40%)
• Gaps: 73/344 - (21%)

  Fly    60 TSLYAGNPMENAAAAAAAAAA---GLIDPHHNRDLHQ-------ALVASIANNSVAAIGGGLTTA 114
            :|.|..:.:..:|||.|::||   .|:..|.|..|..       .|||:..|..:  :...:...
plant     2 SSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLI--LHSNIRRH 64

  Fly   115 AVLKSAAQQSQQAVQQNQNAVVVTPGLEQPKQEPAQQAALALLKENVNASAGAGQNNGQAAMGGS 179
            ....:|..::..|..:.|.:|          :|          :|.|......|:...:.....:
plant    65 RFFCAAETEASSADDEIQASV----------EE----------EEEVEEEGDEGEEEVEEEKQTT 109

  Fly   180 NKSGSSGRSTPSLSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSR 244
            ..||..||                 |:||.|.:..:|.:|.:.|...|||.||.|:.|.||.|||
plant   110 QASGEEGR-----------------LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSR 157

  Fly   245 GFGFITFQEPCTVEKVLKVPIHTLDGKKIDPKHA------TPKNRPRQANKTK------------ 291
            ||||:|..   ::|:. |..:...:..:|..:..      .|:....:..:||
plant   158 GFGFVTMG---SIEEA-KEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSP 218

  Fly   292 -KIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFEN-EDVVDRVCEIHFH 354
             |::.|.:..:.:::.:|..|.....|....::.::.|.|.|||||::||: |:|...:..::..
plant   219 HKVYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGV 283

  Fly   355 TIKNKKVECKKAQPKEAVT 373
            .::.:.:....|..:|..|
plant   284 EVEGRALRLNLASEREKPT 302

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	27/73 (37%)
		RRM2_MSI	292..365	CDD:240769	16/73 (22%)
CP33	NP_190806.1	RRM_SF	117..196	CDD:473069	28/99 (28%)
		RRM2_NsCP33_like	220..295	CDD:410187	16/74 (22%)