Protein Alignment msi and AT3G15010

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_188119.1
• Gene: AT3G15010 / 820730
• AraportID: AT3G15010
• Length: 404
• Species: Arabidopsis thaliana
• Alignment Length: 409
• Identity: 90/409 - (22%)
• Similarity: 141/409 - (34%)
• Gaps: 91/409 - (22%)

  Fly   157 LKENVNASAGAGQN-NGQAAMGGSNKSGSSGRS------------------------TPSLSGGS 196
            |.||     |.|.| ||...:|.:..|....|.                        ..|:...:
plant     9 LDEN-----GNGLNTNGGGTIGPTRLSPQDARKIIERFTTDQLLDLLQEAIVRHPDVLESVRLTA 68

  Fly   197 GSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVL 261
            .||.:..|||:.||:..|:::.|:..|:.:|.:.:.:::.|.||.:|:|:||:||.........|
plant    69 DSDISQRKLFIRGLAADTTTEGLRSLFSSYGDLEEAIVILDKVTGKSKGYGFVTFMHVDGALLAL 133

  Fly   262 KVPIHTLDGKKIDPKHATPKNRPRQAN----KTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVM 322
            |.|...:||:....:.|...|:...:.    ..:||:|..|..|..|:.:..:|..:|.|||..:
plant   134 KEPSKKIDGRVTVTQLAASGNQGTGSQIADISMRKIYVANVPFDMPADRLLNHFMAYGDVEEGPL 198

  Fly   323 LMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKA-QPKEAVTPAAQLLQKRIMLG 386
            ..|:.|.:.|||....::..:............|..|.:.||.| ..|:...|.
plant   199 GFDKVTGKSRGFALFVYKTAEGAQAALADPVKVIDGKHLNCKLAVDGKKGGKPG----------- 252

  Fly   387 TLGVQLPTAPGQLIG---ARGAGVATMNPLAMLQNPTQLLQSPAAAAAAQQA--ALISQNPFQVQ 446
                 :|.|.....|   ..|.|:..:.|           ..|..||....|  ......|....
plant   253 -----MPQAQDGGSGHGHVHGEGMGMVRP-----------AGPYGAAGGISAYGGYSGGPPAHHM 301

  Fly   447 NAAAAASIANQAGFGKLLTTY------------------PQTALHSVRYAPYSIPASAATANAAL 493
            |:..::.....||:|.....|                  |.|.....|..|.|:|.......:
plant   302 NSTHSSMGVGSAGYGGHYGGYGGPGGTGVYGGLGGGYGGPGTGSGQYRMPPSSMPGGGGYPES-- 364

  Fly   494 MQAHQAQSVAAA--AHHHQ 510
              .|...|.:|.  ..|||
plant   365 --GHYGLSSSAGYPGQHHQ 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	23/73 (32%)
		RRM2_MSI	292..365	CDD:240769	19/72 (26%)
AT3G15010	NP_188119.1	RRM_SF	75..150	CDD:473069	23/74 (31%)
		RRM2_NsCP33_like	168..242	CDD:410187	20/73 (27%)