Protein Alignment msi and AT3G06970

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_187353.2
• Gene: AT3G06970 / 819882
• AraportID: AT3G06970
• Length: 317
• Species: Arabidopsis thaliana
• Alignment Length: 140
• Identity: 36/140 - (25%)
• Similarity: 64/140 - (45%)
• Gaps: 21/140 - (15%)

  Fly   192 LSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCT 256
            :|..:..|....|:|||.|:|:|::|.|:.||..||.|.|..::.:....||:|:|||||::..:
plant     1 MSQTNNHDTRVTKIFVGNLTWRTTADDLRRYFEQFGQVVDANVVSETYPGRSKGYGFITFRDYVS 65

  Fly   257 VEKVLKVPIHTLDGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETV 321
            ..:.|:.....:||:..:...|:                .|..|:.:...:...|:...|..:.
plant    66 TVRALQNSKPIIDGRTTNCNLAS----------------AGAKQNMNHPNLNGSFNYVIPPHQY- 113

  Fly   322 MLMDQQTKRH 331
                ||..:|
plant   114 ----QQAPQH 119

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	26/73 (36%)
		RRM2_MSI	292..365	CDD:240769	7/40 (18%)
AT3G06970	NP_187353.2	PABP-1234	<3..182	CDD:130689	35/138 (25%)
		RRM_SF	12..87	CDD:473069	26/74 (35%)