Protein Alignment msi and Rbm31y

DIOPT Version :9

• Sequence 1: NP_001247303.1
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_083246.1
• Gene: Rbm31y / 74484
• MGIID: 1921734
• Length: 565
• Species: Mus musculus
• Alignment Length: 441
• Identity: 121/441 - (27%)
• Similarity: 181/441 - (41%)
• Gaps: 98/441 - (22%)

  Fly   204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTL 268
            |:|:||||.:.|...|.||.:.||.:.|.:|..||.|..||||||:.|::..||||||:|..|.:
Mouse    34 KMFIGGLSQEMSKQVLLEYLSKFGEIIDFIIKTDPNTGLSRGFGFVLFKDSATVEKVLQVKDHKV 98

  Fly   269 DGKKIDPKHATPKNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRG 333
            |||||:.|.|  |....|. ..|||||||::...|.|:::|||..||.:|...:.:...|:..|.
Mouse    99 DGKKIEFKRA--KALESQF-PNKKIFVGGLNPRLSEEKIRAYFGTFGQIEAIELPLCSDTRERRA 160

  Fly   334 FGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAAQLLQK------RIMLGTLGVQL 392
            |||:.:.:|:.|.:|.|..:|.|.:.:.|.|.|.|||  .||.||.::      |.......|:|
Mouse   161 FGFIKYMDENSVRKVLENRYHFIGSSRCEVKMAYPKE--NPARQLSKRKAIAKDRTRKSVPAVEL 223

  Fly   393 PTAPGQLIGARGAGVATMNPLAMLQNPTQLLQSPA----AAAAAQQAALISQNPFQVQNAAAAAS 453
            ..      ..||.|                  ||:    |.:.||:|.         |:|..|.|
Mouse   224 EN------NWRGGG------------------SPSFHIMANSEAQEAN---------QDAHRAGS 255

  Fly   454 IANQAGFGKLLTTYPQTALHSVRYAPYSIPASAATANAALMQAHQAQSVAAAAHHHQQQQQQQHH 518
            ..::|.....||.     ....|.:|     :|...|:.:...:....:|::
Mouse   256 YTSRANSDVTLTN-----ACGFRDSP-----NAFHVNSNVFVTNSTTFIASS------------- 297

  Fly   519 HQQQTHNAHVAAAQQQQQSHHNAVSNPASQAHSAAAAAALAANAANGAGAAGAHSLAAAAQQAGL 583
                  ||..::......||:...:||.:...|......::..........|.:..|....|..|
Mouse   298 ------NALRSSTNTVGVSHYTLDANPNTFLASQYTLGTISNTLRTSQYTLGTYPNALGVSQYAL 356

  Fly   584 MAGNPLNAAAAAAAAAANPAAAYSN-YALANVDMSSFQGVDWSTMYGMGMY 633
                                |||.| :.:....:.:.|...|:..|.:|.|
Mouse   357 --------------------AAYPNTFGINQYPLEADQNAFWTNQYPLGTY 387

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_001247303.1	RRM1_hnRNPA_hnRNPD_like	205..276	CDD:240771	36/70 (51%)
		RRM2_MSI	292..365	CDD:240769	26/72 (36%)
Rbm31y	NP_083246.1	RRM_SF	35..108	CDD:302621	37/72 (51%)
		RRM_SF	119..193	CDD:302621	27/73 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D496221at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.920