DRSC/TRiP Functional Genomics Resources

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Protein Alignment msi and TIAL1

DIOPT Version :10

Sequence 1:NP_733108.2 Gene:msi / 43087 FlyBaseID:FBgn0011666 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001029097.1 Gene:TIAL1 / 7073 HGNCID:11804 Length:392 Species:Homo sapiens


Alignment Length:442 Identity:98/442 - (22%)
Similarity:167/442 - (37%) Gaps:107/442 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SLYAGNPMENAAAAAAAAAAGLIDPHHNRDLHQALVASIANNSVAAIGGGLTTAAVLKSAAQQSQ 125
            :||.||                    .:||:.:.|:..:    .:.||       ..||....::
Human    10 TLYVGN--------------------LSRDVTEVLILQL----FSQIG-------PCKSCKMITE 43

  Fly   126 QAVQQNQNAVVVTPGLEQPKQEPAQQAALALLKENVNASAGAGQNNGQAAMGGSNKSGSSGRSTP 190
            |...:..|:.|....|:....:|   .......|:.:|:|.....||:..:|...|  .:..:||
Human    44 QPDSRRVNSSVGFSVLQHTSNDP---YCFVEFYEHRDAAAALAAMNGRKILGKEVK--VNWATTP 103

  Fly   191 SLSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPC 255
            |......|:..  .:|||.||.:.:::.:|..|..||.::|..::||..|.:|:|:||::|....
Human   104 SSQKKDTSNHF--HVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKL 166

  Fly   256 TVEKVLKVPIHT----LDGKKIDPKHAT---PKNRPRQANKTKK----------------IFVGG 297
            ..|..:   :|.    |.|::|....||   |..:..|.|.||:                ::.||
Human   167 DAENAI---VHMGGQWLGGRQIRTNWATRKPPAPKSTQENNTKQLRFEDVVNQSSPKNCTVYCGG 228

  Fly   298 VSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFE-NEDVVDRVCEIHFHTIKNKKV 361
            ::...:.:.::..||.||      .:|:.:....:|:.||.|. :|.....:..::..||:...|
Human   229 IASGLTDQLMRQTFSPFG------QIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVV 287

  Fly   362 ECKKAQPKEAVTPAAQLL---------------QKRIMLGTLGVQLPT--APGQLIGARGAGVAT 409
            :|...:....:|...|.:               |:.......|.|:|.  ..||....:|.||. 
Human   288 KCYWGKESPDMTKNFQQVDYSQWGQWSQVYGNPQQYGQYMANGWQVPPYGVYGQPWNQQGFGVD- 351

  Fly   410 MNPLAMLQNPTQLLQSPAAAAAAQQAALISQNPFQVQNAAAAASIANQAGFG 461
                          |||:||......|    .|.|.|.........||||:|
Human   352 --------------QSPSAAWMGGFGA----QPPQGQAPPPVIPPPNQAGYG 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msiNP_733108.2 RRM_SF 204..278 CDD:473069 23/77 (30%)
RRM2_MSI 292..365 CDD:240769 16/89 (18%)
TIAL1NP_001029097.1 RRM1_TIAR 10..107 CDD:410028 26/132 (20%)
RRM2_TIAR 113..192 CDD:410029 24/83 (29%)
RRM3_TIAR 222..294 CDD:241064 16/77 (21%)

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