DRSC/TRiP Functional Genomics Resources

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Protein Alignment msi and Dazap1

DIOPT Version :10

Sequence 1:NP_733108.2 Gene:msi / 43087 FlyBaseID:FBgn0011666 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_001365924.1 Gene:Dazap1 / 70248 MGIID:1917498 Length:407 Species:Mus musculus


Alignment Length:420 Identity:128/420 - (30%)
Similarity:181/420 - (43%) Gaps:81/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   196 SGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 260
            :|:|.. ||||||||.|.|:.:.|:.||:.:|.|.|.:||||..|.:||||||:.|::|..|..|
Mouse     4 AGADEI-GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTV 67

  Fly   261 LKVPIHTLDGKKIDPKHATP------KNRPRQ---------ANKTKKIFVGGVSQDTSAEEVKAY 310
            |....|||||:.||||..||      :.||::         ::|:.||||||:..:....|::.|
Mouse    68 LASRPHTLDGRNIDPKPCTPRGMQPERTRPKEGWQKGPRSDSSKSNKIFVGGIPHNCGETELREY 132

  Fly   311 FSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVT-- 373
            |.:||.|.|.||:.|.:.:|.|||||:|||:|..||:...:|||.|..||||.|:|:|:::..  
Mouse   133 FKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRAEPRDSKNQA 197

  Fly   374 ---PAAQLLQKRIM------------------LGTLGVQLPTAPGQLIGARGAGVATMNPLAMLQ 417
               |.|.....|:.                  .|..|:.:|.  ||.||..|             
Mouse   198 PGQPGASQWGSRVAPSAANGWAGQPPPTWQQGYGPQGMWVPA--GQAIGGYG------------- 247

  Fly   418 NPTQLLQSPAAAAAAQ-----QAALISQNPF---QVQNAAAAASIANQAGFGKLLTTYPQTALHS 474
                  ..||...|..     .:.::|..|.   ..|..........|..||     |.......
Mouse   248 ------PPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFG-----YGPPPPPP 301

  Fly   475 VRYAPYSIPASAATANAALMQAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHH 539
            .::||..:|...||..||.:......|.||.........|....:.|      .|...|......
Mouse   302 DQFAPPGVPPPPATPGAAPLAFPPPPSQAAPDMSKPPTAQPDFPYGQ------YAGYGQDLSGFG 360

  Fly   540 NAVSNPASQ--AHSAAAAAALAANAANGAG 567
            ...|:|:.|  ::...:........|.|:|
Mouse   361 QGFSDPSQQPPSYGGPSVPGSGGPPAGGSG 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msiNP_733108.2 RRM_SF 204..278 CDD:473069 40/73 (55%)
RRM2_MSI 292..365 CDD:240769 36/72 (50%)
Dazap1NP_001365924.1 RRM1_DAZAP1 11..92 CDD:409988 42/80 (53%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..117 15/42 (36%)
RRM2_DAZAP1 111..190 CDD:409765 39/78 (50%)

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