Protein Alignment msi and Rbm28

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_598686.2
• Gene: Rbm28 / 68272
• MGIID: 2655711
• Length: 750
• Species: Mus musculus
• Alignment Length: 214
• Identity: 56/214 - (26%)
• Similarity: 95/214 - (44%)
• Gaps: 49/214 - (22%)

  Fly   205 LFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLD 269
            ||||.|.....||:|:|.|:..|.|....::.:..::..||||::||.....|::.|| .|.|.:
Mouse     6 LFVGRLPPSARSDQLEELFSQVGPVKQCFVVTEKGSKACRGFGYVTFSMLEDVQRALK-EITTFE 69

  Fly   270 GKKIDPKHA------------------TPKNRPRQ-----ANKTKKIFVGGVSQDTSAEEVKAYF 311
            |.|||...|                  :||..|:.     |:|..::.:..:|...|.:::||.|
Mouse    70 GCKIDVTVAKKKLRNKSKETRKNENAESPKKEPKHKKAKVADKKARLIIRNLSFKCSEDDLKAVF 134

  Fly   312 SQFGPVEETVMLMDQQTKRHRGFGFVTFEN-------------EDVVDRVCEIHFHTIKNKKVEC 363
            :.:|.|.| |.:..:...:.|||.||.|:|             :::..|...:.:...|:|..:.
Mouse   135 THYGTVLE-VNIPKKPDGKMRGFAFVQFKNLLEAGKALKGANMKEIKGRTVAVDWAVAKDKYKDA 198

  Fly   364 KKA-----------QPKEA 371
            :.|           :|||:
Mouse   199 QHASAPGVKKSSDRKPKES 217

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	27/72 (38%)
		RRM2_MSI	292..365	CDD:240769	19/85 (22%)
Rbm28	NP_598686.2	RRM1_RBM28_like	5..81	CDD:409847	28/75 (37%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	84..110		3/25 (12%)
		RRM2_RBM28_like	115..190	CDD:409848	17/75 (23%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	195..320		4/23 (17%)
		RRM3_RBM28_like	325..407	CDD:409849
		RRM4_RBM28_like	477..571	CDD:409850
		PTZ00108	<563..740	CDD:240271
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	587..716