DRSC/TRiP Functional Genomics Resources

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Protein Alignment msi and Zcrb1

DIOPT Version :10

Sequence 1:NP_733108.2 Gene:msi / 43087 FlyBaseID:FBgn0011666 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_080301.1 Gene:Zcrb1 / 67197 MGIID:1914447 Length:217 Species:Mus musculus


Alignment Length:141 Identity:35/141 - (24%)
Similarity:57/141 - (40%) Gaps:42/141 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   192 LSGGSGSDPAPGKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEP-- 254
            :|||..  |:...::|..|.:..:::.|...|:.:|.|..|.||||..|::|:|..||.|.:.  
Mouse     1 MSGGLA--PSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDS 63

  Fly   255 ---CT--------VEKVLKVPIHTLDGKKID---------------------PKHATPKNR---- 283
               ||        ..:|:|..|...:|:..:                     ..:|.|||.    
Mouse    64 ALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYACPKNMLGER 128

  Fly   284 --PRQANKTKK 292
              |::..|.||
Mouse   129 EPPKKKEKKKK 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
msiNP_733108.2 RRM_SF 204..278 CDD:473069 23/107 (21%)
RRM2_MSI 292..365 CDD:240769 1/1 (100%)
Zcrb1NP_080301.1 RRM_ZCRB1 9..84 CDD:409827 21/74 (28%)
PTZ00368 <97..123 CDD:173561 2/25 (8%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 120..217 7/20 (35%)

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