Protein Alignment msi and dazap1

DIOPT Version :9

• Sequence 1: NP_001247303.1
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: XP_021335308.1
• Gene: dazap1 / 561459
• ZFINID: ZDB-GENE-070212-1
• Length: 469
• Species: Danio rerio
• Alignment Length: 451
• Identity: 149/451 - (33%)
• Similarity: 203/451 - (45%)
• Gaps: 67/451 - (14%)

  Fly   203 GKLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHT 267
            ||||||||.|.|:.:.|:.||:.:|.|.|.:||||..|.:||||||:.|::|..|..||....|.
Zfish    23 GKLFVGGLDWSTTQETLRNYFSQYGEVVDCVIMKDKSTNQSRGFGFVKFKDPNCVRTVLDTKPHN 87

  Fly   268 LDGKKIDPKHATP--------------KNRPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVE 318
            |||:.||||..||              |.....:||:|||||||:..:....|::.||::||.|.
Zfish    88 LDGRNIDPKPCTPRGMQPEKTRTKDGWKGSKSDSNKSKKIFVGGIPHNCGEAELRDYFNRFGVVT 152

  Fly   319 ETVMLMDQQTKRHRGFGFVTFENEDVVDRVCEIHFHTIKNKKVECKKAQPKEAVTPAAQLL---- 379
            |.||:.|.:.:|.|||||:|||.|..||:...:|||.|..||||.|||:|:::..||...|
Zfish   153 EVVMIYDAEKQRPRGFGFITFEAEQSVDQAVNMHFHDIMGKKVEVKKAEPRDSKAPAPGQLGANQ 217

  Fly   380 --QKRIMLGTLGVQLPTAP--GQLIGARGAGVATMNPLAMLQNPTQLLQSPAAAAAAQQAALISQ 440
              .:.|:....|.....||  .|..|.:|..|:|..|||....|.     ||...|..||    .
Zfish   218 WGPRAIISAANGWAAQPAPTWQQSYGPQGVWVSTGQPLAGYGPPL-----PAGRGAPAQA----P 273

  Fly   441 NPFQVQNAAAAASIANQAGFGKLLTTYPQTALHSVRYAPYS-------------IPASAATANAA 492
            :||.....||..:    .||| ....|||....:.....||             :|...||..|.
Zfish   274 SPFNAFLVAAPPT----GGFG-APQGYPQQGFSTQPQFGYSFGTPQGDQFVAQGMPPPPATPGAG 333

  Fly   493 LM------QAHQAQSVAAAAHHHQQQQQQQHHHQQQTHNAHVAAAQQQQQSHHNAVSNPASQAHS 551
            .:      ...|..|.||.|.......|.::..:..|........ :.|:...|...:|::...:
Zfish   334 PLGFAPATTPSQDLSKAAPAQPDFSYSQYEYLLRCSTEEGKPFMV-ELQEGLGNYPQDPSAYGPT 397

  Fly   552 AAAAAALAANAANGAG-----AAGAHSLAAAAQQAGLMAGNPLNAAAAAAAAAANPAAAYS 607
            ..:...:.......||     :|..||.|..:|.....      |||.:|.::..||||.|
Zfish   398 RPSHTYVQEEQGYSAGYGQDLSAFGHSFADPSQPTASY------AAAPSAPSSGAPAAASS 452

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_001247303.1	RRM1_hnRNPA_hnRNPD_like	205..276	CDD:240771	36/70 (51%)
		RRM2_MSI	292..365	CDD:240769	36/72 (50%)
dazap1	XP_021335308.1	RRM1_DAZAP1	24..105	CDD:241018	41/80 (51%)
		RRM2_DAZAP1	127..202	CDD:240773	38/74 (51%)
		FtsK	<220..>430	CDD:332908	50/224 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG4205
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000417
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X310
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	4	3.810