Protein Alignment msi and tra2b

DIOPT Version :10

• Sequence 1: NP_733108.2
• Gene: msi / 43087
• FlyBaseID: FBgn0011666
• Length: 634
• Species: Drosophila melanogaster
• Sequence 2: NP_001006878.1
• Gene: tra2b / 448667
• XenbaseID: XB-GENE-5864557
• Length: 293
• Species: Xenopus tropicalis
• Alignment Length: 194
• Identity: 47/194 - (24%)
• Similarity: 82/194 - (42%)
• Gaps: 39/194 - (20%)

  Fly   158 KENVNAS-AGAGQNNGQAAMGGSNKSGSSGRSTPSLSGGSGSDPAPGKLFVGGLSWQTSSDKLKE 221
            :|:.:|| :|:.:.:|::|....|.|.:..||.      .||..:..|......|...|....:.
 Frog    12 RESRSASRSGSARQSGKSASQSPNHSAARSRSK------EGSRHSRSKTRSRSDSRSRSRRSSRR 70

  Fly   222 YFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKVLKVPIHTLD-GKKIDPKHATPKNRPR 285
            ::....|       :....:|||...                  |:.| .::....|:....|.|
 Frog    71 HYTRSRT-------RSRSRRRSRSRS------------------HSRDYRRRRSHSHSPMSTRRR 110

  Fly   286 ----QANKTKKIFVG--GVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENED 343
                :||......:|  |:|..|:..:::..||::||:.:..::.|||::|.|||.||.|||.|
 Frog   111 HVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPISDVSIVYDQQSRRSRGFSFVYFENVD 174

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
msi	NP_733108.2	RRM_SF	204..278	CDD:473069	9/74 (12%)
		RRM2_MSI	292..365	CDD:240769	21/54 (39%)
tra2b	NP_001006878.1	RRM_TRA2	121..200	CDD:409798	21/54 (39%)